Pyrenophora tritici-repentis: 6339127
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Entry
6339127 CDS
T10215
Symbol
PtrM4_012760
Name
(RefSeq) SrmB, Superfamily II DNA and RNA helicase
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptrr03009
]
6339127 (PtrM4_012760)
Enzymes [BR:
ptrr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6339127 (PtrM4_012760)
Ribosome biogenesis [BR:
ptrr03009
]
Eukaryotic type
90S particles
Helicases
6339127 (PtrM4_012760)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Cas3-like_C_2
TLP-20
GCOM2
Motif
Other DBs
NCBI-GeneID:
6339127
NCBI-ProteinID:
XP_065965270
UniProt:
A0A2W1DED5
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Position
1:<3216521..>3219075
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AA seq
731 aa
AA seq
DB search
MRQHQSRVALKTRYSTEMVAPGITGRTRPTKVKKRENLQKRKRDDVDVEKLEQAVQALDT
KHGSYKDFTDLPLSDPTKQGLKSSHFAVMTDVQAKSIPLALQGHDILGAAKTGSGKTLSF
IIPVLENLYRLQHIGPDAGLGALILSPTRELAIQIFDVLRKIGRHGHMFAAGLLIGGKSL
KDEREALTKMNILVATPGRMLQHLSQTAAFSVDDLKILVLDEADRILDMGFQRDVDAIVE
YLPKERQTLLFSATQSKKVSDLARLSLQEPEYVSVHAEDKSATPKGLTQNYIICPLEEKL
DTLWSFIQASKKSKILCFFSSAKTVRFVYESFRHMQPGIPLLHIHGRQKQGARLDTTAKF
SAAKHSCLFATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTARYNREGRGVLFLAP
SEEEGMLKRLEAKRVPVEAINVRQKKRQSIKDQLQNMCFQDPALKYLGQKAFMTHVKSIY
LQKDKEVFKLKEYNLEAYAASLGLPGTPRIKFLKDDNSKQRKQASRQTIEVSDSSDDEEI
PKADKPVRTKYDRMFERKNQDVLAEHYQKLVRSGDEGAPTDDFSGSGANNAADDDFMAVK
RRIPADDEDEDLGDGQGLQVPPGGRIVHIAGASQPLVIDSNRREKLLQSKKKLTKLMDKG
KKLIYDDEGNPHEVYKLEDEEQFRAKGLPEDQRQKFIEAAREVVETADATHRVEEPETLE
DMEALAAGLLG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagcaccaatcccgagtcgcgctcaagacacgatacagcactgaaatggttgcg
cctggaattactggtcgcacacggcctaccaaggtcaagaagcgtgaaaacctgcaaaag
aggaagcgtgacgatgtcgatgtcgaaaagctggaacaagccgtccaggcactggatacc
aaacatggctcctacaaagacttcaccgacctaccgctatctgatccgaccaagcaaggc
ctcaagtcgtcgcatttcgccgtcatgaccgacgtccaggcaaaatccataccgctagct
ctccaagggcacgacattctcggtgcagccaagactggaagtggaaagactctctctttc
atcatacctgtgctggaaaacctgtatcggctacagcatatcgggccagacgccggcttg
ggcgcgctgattctgtccccaacacgagaactcgcaattcaaatcttcgacgtactacgt
aagattggacggcatgggcatatgtttgcggctgggttgttgataggcggcaagagtttg
aaagacgagagagaggctttgacaaagatgaatattctggtagcaacaccgggcaggatg
ctgcagcatctgtcgcaaacagcagcctttagtgtcgatgacctgaaaatcctggtgctg
gacgaggcagatcgcattctagacatgggcttccaacgggatgtggacgccatcgttgaa
tatcttcccaaagagaggcagacgttgctcttctcggccacacaatccaagaaggtctcc
gatctcgcacgattgagcctccaagagcccgaatatgtatcagtacacgccgaagataaa
agtgcaacgcccaaaggtctcactcagaactacatcatctgcccgctggaagagaagctg
gacacattgtggagttttatacaggcgagcaagaagtccaagattctctgcttcttttcg
tctgctaaaacggtccgattcgtctacgaatccttccgtcacatgcagcccggtatacca
ctactgcacatccacggtcgccagaaacaaggcgctcgactcgacaccacggccaagttt
tcggcagccaagcactcgtgtctttttgcaacggatgttgcagctcgaggtctagatttc
cccgcggttgactttgtgatacaagtcgactgcccggatgatgtggatacttatattcac
cgtgtcggtcgaacagcacgatacaaccgagaagggcgtggtgtgctgttcctagcaccc
agcgaagaggagggcatgttgaaacggttagaggcgaagagagtgcccgttgaggcgatc
aatgtgagacaaaagaagcgacaatccatcaaggaccagctacagaacatgtgttttcag
gatccggccctgaagtatcttggacagaaggcgttcatgacacacgtcaagtcgatctat
ttgcaaaaggataaagaagtcttcaaactgaaagagtacaatctagaagcctacgctgct
agcttaggtcttccgggaacacctagaatcaagttcttgaaagacgacaacagcaagcag
aggaaacaagcatcacgacaaactatcgaggtttcagactcgtcagatgacgaagagatt
cccaaggcagataaacctgtgcgaaccaagtacgatcgcatgttcgagcggaagaatcag
gatgttctggcagagcactaccagaagcttgtcaggagtggagatgaaggggctccgacg
gacgacttcagcggctctggggcgaacaatgcagccgatgacgacttcatggccgtcaag
cgaagaataccggctgacgatgaagatgaggacctcggtgatggccaaggcctacaagtt
cccccaggaggtcgtattgtccatattgcgggagcctcccaaccgttggtcattgacagc
aatcggcgcgagaaactgctacaatccaagaagaagcttacaaaactcatggacaagggc
aaaaagcttatctacgacgacgaaggaaatcctcacgaggtttacaaacttgaagacgaa
gagcaattccgtgccaagggtctgcccgaagaccagcgacagaagttcattgaagcagca
cgagaggttgtggagactgctgatgccacacacagggtggaggagccggagacgctagag
gacatggaggctcttgctgctggtttgctgggctaa
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