Pyrenophora tritici-repentis: 6339182
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Entry
6339182 CDS
T10215
Symbol
PtrM4_025560
Name
(RefSeq) Nfo, Endonuclease IV
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
6339182 (PtrM4_025560)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6339182 (PtrM4_025560)
Enzymes [BR:
ptrr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
6339182 (PtrM4_025560)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
6339182 (PtrM4_025560)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
RNF216P1
Motif
Other DBs
NCBI-GeneID:
6339182
NCBI-ProteinID:
XP_065965867
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All DBs
Position
1:<6527263..>6528814
Genome browser
AA seq
476 aa
AA seq
DB search
MAKKLSSSRAAMSSDNTTSAPVAETAPEPSTGGGRKRKAGAKPAVQDKKVKVEETSSLST
TARPKRAAAKKPAVEEDEVADEVVEDKVKAKAKTTRAKKASSTATKHAKILPPLEQRTQN
TKHRIGAHVSIAGGVHNAIINTIYIGANAFAMFMKNQRKWESKDIDQEHVDFFVKWCEDH
KINAAECCLPHGSYLVNLAHPDPAHKKQSYDSFLNDLSRCHRLGIRLYNFHPGNSNATTR
EEGIITISENINQAHADPASGKVVTVLETMASLGNTIGGNFTDIAAIIRLVNDKSRVGVC
LDTCHVFAAGYDLRTPEAYAKTIDKFDKEIGLEYLKAFHVNDSKAPFSSHRDVHARIGTG
YLGLQAFHNLMNDERFHGLPMVLETPCDTLDADGKKVEDKGSWAREIKMLESLVGMDIES
DEFKALDTRLQQEGATERERIGDQVNRKAIKDAKPKRATKKASKKKVESEEDGDEE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctctctagctctcgcgcagctatgtcttcggacaacaccacatcggct
ccggttgctgagacagcgccggagccaagcacgggcggcggcaggaagcgcaaggcgggc
gcaaagcccgccgtgcaagacaagaaggtcaaggtggaagagacctcgtctctctcaaca
actgcgcgtccaaagcgtgccgcagccaagaaaccagctgttgaggaggacgaggtcgca
gacgaagtcgtcgaagacaaagtcaaggccaaggcaaagaccactagggcgaagaaggcc
tcttccaccgcgacgaaacatgcgaagatcctgccgccgcttgagcaacgcacgcagaac
accaagcaccgcattggcgctcatgtcagcatcgcaggtggcgtacacaatgccatcatc
aacaccatatacatcggtgccaacgcctttgccatgttcatgaaaaatcagcgcaagtgg
gagtcaaaagacatcgaccaagagcacgtcgatttctttgtcaagtggtgcgaagatcac
aagatcaatgctgcagagtgttgcctgccacatggttcatatctcgtcaacctagcacac
cctgacccagcacacaagaagcaatcatatgactccttcctcaacgacttgtctcgctgc
cacaggctaggcatccgactctacaactttcaccccggaaactccaacgctacaactcgc
gaggaggggatcatcaccatctcagaaaacatcaaccaagctcatgcagatccggcgtct
ggcaaggtcgtgaccgttttggaaaccatggcgagcctaggtaacaccatcggtggtaac
tttacagacatcgctgccatcatcaggcttgtcaatgacaagagccgcgttggagtttgc
ctggacacgtgccacgtattcgcagctggttacgacttgcgcaccccagaggcctacgcg
aagacaatagacaagttcgacaaggagatcggcctcgagtacctcaaggccttccatgtc
aacgacagtaaggctccattctccagccaccgcgatgtccacgcccgcatcggcaccggt
tatttgggtcttcaggctttccacaacctgatgaacgacgagcgcttccatggtctcccc
atggtcctcgagacaccctgtgacacactggatgctgatggcaagaaagtggaggacaag
ggcagctgggcacgagagataaagatgctcgagagcctcgtgggtatggacattgaatca
gatgagtttaaggcgctcgatacacgtcttcagcaggaaggcgcgactgagcgcgagcgc
attggagatcaggtcaacaggaaagctatcaaggacgccaagcccaagagagccaccaag
aaggcaagcaagaagaaggtggagagcgaggaagatggcgatgaggaataa
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integrated database retrieval system
