Pyrenophora tritici-repentis: 6339331
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Entry
6339331 CDS
T10215
Symbol
PtrM4_028960
Name
(RefSeq) TadD, Flp pilus assembly protein TadD
KO
K12855
pre-mRNA-processing factor 6
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6339331 (PtrM4_028960)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
6339331 (PtrM4_028960)
Spliceosome [BR:
ptrr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
6339331 (PtrM4_028960)
Complex C
U5 SnRNP specific factors
6339331 (PtrM4_028960)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_16
Suf
TPR_CcmH_CycH
ChAPs
VirB4_TrbE_N
HSP30_N
Motif
Other DBs
NCBI-GeneID:
6339331
NCBI-ProteinID:
XP_001932630
UniProt:
B2VVI2
LinkDB
All DBs
Position
1:<7467652..>7470548
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AA seq
929 aa
AA seq
DB search
MSRRDFLSMPAPENYVAGLGRGATGFTTRSDLGPAREGPSEEQMKEMLAKRAASLGQAAP
SAYGVTEKKEEERDEEEDRFQDPDNEVGLFSSGMNYDKEDDEADRIYQEVDEKMDKRRRA
RREAREQQERDEYERNNPKIQLQFADLKRALGGVSEEEWAALPEVGDMTGKAKRAREARM
ANSRSYAVPDSVLAAASKSGELDTSISSDADGMTTNLASIGAAQLSALTVRLDSAASAPG
SQTTTTSGTTTSVDPKGYMTALSRKEAMGGEVPVEDINRARVLLESAVKTNIHNGPGYVA
LARLEEVAGKIHTAKKVIARGCELCPKSIVVWEEAIRLNRDNLHNAKIIAANGIKQNPKA
VKLWEAAIDLEQTQAARKKVTRQALDHNPQSVELWKTLINDTEELDAVRLLFAKATETIP
LAEELWVSYARVSEPEAAQQILNKARKAIPTSWAIWIHACRLQEELGKVDMLDMIMSRAV
KSLIKENAMIKREEWIAQAEICEEQGDKGTAAAIIKATVGWGLDEDDDRRDVWLEDARSV
LNRNKPETARAILGFAVAVFPYSTTVWHASTDLEKHHGTTDTLLNVLERAVNACPNSESL
WLLYAREMWQSGNPEGARKVLGRSFEALPGNEMLYTRAVDFEVDAGNFDEARQFLKVARE
SAATDRIFMKSAVLERQLENYETAIDICNQGLQNWPGSWKLHAVKGQVYEQLSKLPEAHE
AFSIGTRAVPKAPVLYILLSRLQVKQGAVVKARSTLDRGRQQNPTSEDILLEQVRLERRQ
NNMNAAQQLMAGALQKCPNSGKLWAEKIMHLENRTQRKPRALEAIKKVEKDAQLFVVVAR
IFWSERRLDKAATWFVKAVTLDSDYGDAWVWYYKFLEQHGTEEKKQDTLSKVALAEPKHG
EIWQSVAKDPKNARLGVEEVLKLAAQNAE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgacgtgacttcttgtccatgcccgcgcccgaaaactatgtggctggtttgggc
agaggagctacgggcttcacgacccggagtgacttgggtcctgctcgtgaggggccgtca
gaggagcaaatgaaggagatgctggcaaagcgtgcggcatccttgggtcaagcagcgcct
tctgcgtatggagtcacagaaaagaaggaggaggagagagacgaggaagaagaccgattc
caggatcctgacaatgaggtcggcctattctcaagtggtatgaactacgacaaggaggac
gatgaggcagaccgcatctaccaggaagtagacgagaaaatggacaaacgccgccgagcc
agaagggaagctcgagagcaacaagaacgtgacgaatacgaacgtaacaacccgaaaatc
cagcttcagttcgccgatttaaaacgagccctcggtggcgtttcggaggaggagtgggca
gcgctgccagaagttggagacatgacaggaaaagcaaagcgtgcacgtgaagctcgtatg
gccaactcgcggtcatatgctgttccggatagtgtattggccgccgcatcgaaaagcggt
gaacttgatacctcgatatcttccgacgctgatggcatgactaccaaccttgcgagtatc
ggtgctgctcagctgtctgcgctgactgtacgactcgactcggcggcgagtgcgcctggc
tcgcaaaccacgacgacttcagggacaacaacatctgtagaccccaaaggatacatgact
gctctgagcaggaaggaggcaatgggtggtgaagtgccagtagaagatattaacagagcc
cgcgttctgctagagtcggccgtcaagaccaacatacacaatggtcctggttacgttgcg
ctggcacgcctcgaagaggtggctggaaagattcatactgctaaaaaggttattgctcgg
ggatgcgaattgtgcccgaaatccatcgtcgtttgggaggaggctatccggttgaatcgc
gacaatctgcacaacgcgaaaatcatcgcagcgaacggcatcaaacagaaccctaaggct
gtgaagctgtgggaagctgcaattgacctggaacagacacaggcagccagaaaaaaggtt
acccgtcaggctttggatcataatcctcagagtgtggagctgtggaagacactcatcaac
gacacagaagagttggatgccgttcgcctcctattcgccaaagcaacagagaccatacca
ctcgctgaagagttatgggtttcttacgcgcgtgtttcagaaccggaagctgcacaacag
attcttaacaaagcgcgcaaggccatcccaaccagttgggccatttggattcacgcctgc
agactccaagaagagcttggcaaggtggatatgttggacatgattatgagccgagctgtc
aaatcccttatcaaagagaacgccatgatcaagcgggaagagtggattgcacaggcggag
atttgtgaggagcaaggggacaagggaacagcagctgccataatcaaggcaactgttggc
tggggtctcgacgaggacgacgatcgcagggatgtgtggctagaagacgctaggagtgtt
ttgaacaggaacaagccagagacagctagagcgatcctgggtttcgctgtcgccgtcttc
ccgtacagcaccacagtttggcacgcgtctacggatcttgaaaagcaccatggcacgacg
gacacactgctgaatgttctggaacgcgcggtaaacgcttgcccgaactcggagtctctg
tggttgctgtacgctcgagagatgtggcagtcaggaaaccctgagggtgctcgcaaggtt
ttgggccgaagtttcgaggctctaccaggtaacgaaatgctgtacactcgcgccgtcgac
ttcgaagtagacgctggtaatttcgatgaggctcgacagttcctcaaagtggcccgtgaa
tcagctgctactgaccgaatcttcatgaagtctgcggtgctcgagcgacagctagagaat
tacgagactgcgatcgacatttgcaatcagggactgcaaaactggccgggtagctggaag
ttgcatgctgtcaagggacaggtgtatgagcagttatcgaagctgcctgaagctcacgag
gccttcagtatcggtacacgtgcggtaccaaaagcgccagttctgtacatcctcctctcc
cgtctacaagtcaagcagggcgcggttgttaaagcgagatcaacgctagatcgtggccga
cagcagaacccaacgagcgaggatatacttcttgagcaggtccgactggagcgtcgccaa
aacaacatgaatgctgctcagcaactcatggctggtgctctgcaaaagtgccccaactca
ggtaaactgtgggcggagaagatcatgcaccttgaaaatcgtacgcagcggaagccgcgt
gcacttgaagccatcaagaaggtcgagaaggatgcacaactattcgttgttgttgcacgt
atcttctggtctgagcgacgacttgacaaggcggcaacgtggttcgtcaaggcagtcact
ctcgacagcgactatggcgacgcgtgggtatggtactacaagtttttggagcagcacggc
accgaagaaaagaagcaggacacattgtccaaggttgcgttggctgagcccaagcatgga
gaaatatggcagtcggtggctaaagacccgaagaatgcacgtctgggcgttgaggaggtt
ctcaagcttgcggcgcagaacgcagagtag
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