Pyrenophora tritici-repentis: 6339420
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Entry
6339420 CDS
T10215
Symbol
PtrM4_007810
Name
(RefSeq) POL4, DNA polymerase IV (family X)
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
6339420 (PtrM4_007810)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6339420 (PtrM4_007810)
Enzymes [BR:
ptrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
6339420 (PtrM4_007810)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
6339420 (PtrM4_007810)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
6339420
NCBI-ProteinID:
XP_065965059
UniProt:
A0A317AE34
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All DBs
Position
1:1958275..1959927
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AA seq
550 aa
AA seq
DB search
MMERLNRTYIPEHIVLVIFDPYVPDSIQFGKLQDSKAQRFMIDDAPPRHDPSDVTEPSQT
STASRTSLRVKPSTRQLAAQDSQQTGSHPTEESIPSTLPVLQASSNIFEDTVLDSFIMPS
PAQTKAPRPKVAEVAFTQTIQEAKALAHLPLDEDEDADSLLASGIDDAEDSGTDEEPLVA
LKPTKLSNILSRSSALRDKKVINMNTFQCMDPGANGYNSQNPNARTIQILEEMCKHYDQM
QDHWRTLSYRKCINTLKKQTVKITTAEQAIALPFIGTRLADKIEEIVLTVRLRRLDSTRD
DPLDKILRLFLGIYGAGLSQANKWIQTGYRTLSDLETKAKLTPSQKVGLEHYTDFNSRIP
RAEVEVHGAVVIAALKKIDPKFKATIMGSYRRGAKDSGDIDMIITCPDTPLAAMRTTVFE
VLVPHLYKTGFLKASLATSRSNDPAGSKWHGASCLPELTVWRRMDLLLVPEEEMGAALIY
FTGNDIFNRSMRLLARKMNMRLNQRGLYKDVKREARGEKLNEGVLVEGRNEKKIFETLGV
PWREPHERIC
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcgcttgaatcgaacgtacattccggaacatatcgtcttggtcatcttcgac
ccctatgtaccagacagtatacagttcggtaaactccaggattcgaaggcgcagcgattc
atgatcgacgatgcgcctcctaggcacgatcctagtgacgtcactgaaccatcacagaca
tcgactgcatcacggacatcgttaagggtcaaaccgtcaacacgtcaactcgctgctcag
gactcgcaacagactggctcacatccaacagaagagagcattccctctactctccctgta
ctacaggcatcctcaaatatctttgaggatacagtcttggatagtttcatcatgccttcc
cctgcacagacaaaggcccccagaccaaaggtagcagaagtcgcctttactcagactata
caggaagccaaggctcttgctcatcttcctcttgatgaagatgaggatgcagattccctt
ttagccagcggaatcgatgatgcagaggactccggtactgacgaagagccccttgtggct
ctcaagcctacaaaattgtcaaacattctttctagatcatcggcattgcgtgacaagaag
gtcatcaatatgaatacattccagtgcatggacccaggcgccaatggatacaactctcag
aacccgaacgcgaggactatccagatattagaggagatgtgcaagcactatgatcagatg
caggatcattggcgaactctgagctatcgcaagtgcatcaacacattgaaaaagcaaaca
gttaaaatcaccacagcagagcaagccatagcactacccttcatcggcactcgacttgct
gataagattgaggagattgtactcacagtccgtcttcgtcgattagatagtacgcgcgat
gaccctttggacaagatcttgcgtctattcctcggtatctacggtgctggcctctctcaa
gcaaacaagtggatacaaacaggctaccgcaccctctccgatcttgagaccaaggcaaag
ctcacaccaagccaaaaagttggcttggaacactatactgacttcaactcgcggattcca
cgcgctgaagtggaagtccatggagctgtcgtcatcgctgcactcaagaagattgaccca
aaattcaaagccactattatgggcagttaccgccgcggcgcaaaggattctggtgacata
gatatgataatcacatgtcccgacacgccacttgctgctatgcgcaccactgtcttcgag
gtcctggtcccacatctctacaagactgggtttctgaaagcctcactggcaacatcccgc
tccaacgaccctgcaggttcaaaatggcacggcgcatcttgtctgcccgagttgactgtg
tggcgtaggatggatctcttgcttgttcccgaggaggaaatgggtgctgcactcatctac
ttcacaggaaacgacattttcaataggagcatgaggcttttggcaaggaaaatgaatatg
aggctgaaccagaggggcttgtataaggatgtaaagagggaagcacggggcgagaagttg
aatgagggagtgctcgtggaaggtcgcaatgagaagaagatcttcgagactcttggagta
ccttggagggagccacatgagaggatttgttag
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