Pyrenophora tritici-repentis: 6339453
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Entry
6339453 CDS
T10215
Symbol
PtrM4_015200
Name
(RefSeq) HepA, Superfamily II DNA-RNA helicase, SNF2 family
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
ptrr Pyrenophora tritici-repentis
Brite
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
6339453 (PtrM4_015200)
RSC complex
6339453 (PtrM4_015200)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
6339453 (PtrM4_015200)
SWI/SNF complex
6339453 (PtrM4_015200)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
6339453
NCBI-ProteinID:
XP_065965372
LinkDB
All DBs
Position
1:complement(3872061..3876287)
Genome browser
AA seq
1391 aa
AA seq
DB search
MASVQANPEMPGQGQLPGNITREQIQHVFQRYTAMKAQGVPETNPEFIKARNLLSMVQKQ
NQYQQQQKMLRQQQMQRQQGQMDPQNAQLNGAGMGMANGTKPATPADAKVTTPMPASTGP
SSTMQVATAGGQTPAGDGQTPTSATAGSMSLSKDQLLMLRAQIGAFKHLSKGLPLPSNMQ
QQIFGHHQAKKPQNAADAVAAASQMLDNATRAGSTSSATGGAVQETRPLPRLPDTFIDPW
SSEAFRDVNYISHTQRKNRPYLATIMPQGVDIDAAQQTMEDLRKERDMLLYNRLTAKRAE
LERTHANIGSWDTSKTDSPEDDGKVKLALVIEQKKLNLLEKQRKLRREIAQQMIHADNLA
MTANRTLYRRLKKQSMREARLTEKLEKQQRDARETKEKKKHHEFIDAIRKHRTELQEAGA
AQRIRLQKLGRLMITTHQNIEKEEQKRIERTAKQRLQALKSNDEETYLKLLGQAKDTRIS
HLLKQTDGFLKQLADSVKAQQRSANNSYEPEPESETSDAESGDEDKPGKKKTDYYEIAHR
VKEEVTQQASNLVGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLI
EKKRQPGPYLVIVPLSTLTNWTNEFEKWAPSVTKIVYKGPPNSRKQYQQQIRWGQFQVLL
TTYEFIIKDRPVLSKIKWVHMIVDEGHRMKNAGSKLSMTITQYYTTRYRLILTGTPLQNN
LTELWAMLNFVLPTIFKSATSFDEWFNTPFANTGGQDKMELTEEEQLLVIRRLHKVLRPF
LLRRLKRDVEKDLPDKTERVIKCNFSTLQAKLYKQLVTHNRLMVSDGKGGKTGMRGLSNM
LMQLRKLCNHPFVFEEVEDVMNPTKGTNDLLWRAAGKFELLDRILPKFQATGHRVLMFFQ
MTQIMNIMEDYLRLRGMMYLRLDGATKADDRSDLLRLFNAPDSPYFCFLLSTRAGGLGLN
LQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEEKILERANYKLDM
DGKVIQAGKFDNKSKDDERDAMLRIMLESAEAAESLEQEEMDDDDLNQIMMRHDHELVTF
QEMDRKRIAEDPYGPGKPLGRLIGESELPDIYLNEEAPIVDEKDDTPAGRGARERTRVKY
DDGLTEEQWLEAVDNDEDTIEAAIARKEAKVAKRGRKSGGRPEEDSPVPSRASSEEPMPK
KRGRKPKAEKRKADEASLDAELAPRKRGRPAPTKDMLHPDQRASLQKVVNIVYEALNDLE
EESQDPNIPNRGIIDPFIELPDKWDYPDYYQLIKNPICMKQIEKKINKKEYQSVKQFRQD
LGLLCNNCRTYNEDTSLLFADANLIEQTALDKLREATAEFPEWQDYDDGGSVHGGASTAM
TSAVGTPRGGL
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggttcaagccaatccggaaatgcccggtcagggtcagcttcctggtaacatc
acccgagagcagattcagcatgtctttcagcgctatactgctatgaaggcgcaaggtgta
cccgagaccaatcccgagtttatcaaggcgcgcaaccttctcagcatggtccagaagcaa
aaccagtaccagcaacagcagaagatgcttagacagcaacaaatgcagcgccaacagggc
caaatggatccgcaaaatgcacagctcaacggcgcaggcatgggcatggcaaatggcacc
aagccagccacacctgctgatgcaaaggttacaacgcccatgccagcttcgaccggtccc
tcctctaccatgcaggttgcaacagctggcggacagactcctgccggagatggccagact
cctacgtcagctactgccggctccatgtctctgtccaaggaccagctcctcatgctgcgt
gcccagatcggagccttcaagcatctttccaagggtctaccattgccctccaacatgcag
caacagatattcggtcaccaccaagcaaagaagccccagaacgctgcagatgccgtggcc
gcagcttcccagatgctcgacaatgcgacccgcgcaggtagcacctcgagcgcgactggt
ggcgcagttcaggagacccgccctctgcctcgtcttcccgatacctttatcgatccatgg
agcagcgaagctttccgtgacgtaaactacatatctcatactcaacgcaagaaccgacca
taccttgcgaccatcatgcctcagggtgtagacattgacgcagcacaacaaaccatggaa
gatttgcgcaaggagcgtgatatgcttctgtacaaccgcctcacggcaaagagagcagag
ctagagaggactcatgctaacattggctcgtgggacaccagcaaaaccgattcccccgaa
gatgacggcaaggtcaaactggctctcgtcatcgaacagaagaagctcaacctgctcgag
aagcagcggaagctgcgtagggagatcgcccaacagatgatccacgcggacaatctcgcc
atgactgcaaatcgaacactctaccgacgcctgaaaaagcaatcgatgcgcgaagcccgc
ctcactgagaagctcgagaagcagcagcgcgatgcgcgcgagacaaaggagaagaagaag
caccacgagttcatcgatgccatcaggaagcaccgcacagagttgcaagaagctggtgct
gctcagcgcatccgtctacagaagcttggtcgtctcatgatcacgacacaccaaaacatc
gagaaggaggagcagaagcgcatcgagcgtactgccaagcaacgtctgcaggctctcaag
tccaacgacgaagagacttacctcaagcttttgggccaagccaaggacactcgtatctca
catttgctcaagcagaccgatggtttcttgaaacaacttgccgactccgtcaaggcacag
cagcgatctgcaaacaactcatacgagccggagccagagagcgaaaccagcgacgccgaa
tctggcgacgaagacaagccaggcaagaagaagaccgactactacgagattgcccatcgt
gtcaaggaagaggtcacccagcaggcatccaacctggttggcggtactctgaaagaatac
caactcaagggtctgcagtggatgatatcgctatacaacaacaaccttaacggtattctt
gccgacgagatgggtctcggaaagaccatccagaccatcagtttgattacgtacctcatc
gaaaagaagcgacagcctggaccctacctggtcattgtaccgcttagtacacttaccaac
tggaccaacgagtttgaaaagtgggcgccgagcgtcaccaagatcgtctacaaggggcct
ccaaactcgcgtaagcaataccagcaacagatccgctggggccagttccaagttctgctc
accacgtacgaattcatcatcaaggacaggccggttctcagcaagatcaagtgggtacac
atgattgtcgacgagggtcaccgtatgaagaacgccggctcgaagctcagcatgactatc
acacagtactacacgacacggtatcgtcttattctgacgggtacgccgctccagaacaac
ctgacagaactgtgggctatgcttaactttgtcctccctaccatcttcaagtcagctaca
tcctttgacgagtggttcaacacaccttttgcaaacactggaggtcaagataagatggag
cttactgaagaagagcagttgctcgtcattcgtcgtcttcacaaagtgctcaggccgttt
ttgctccgacgtctcaagcgcgatgtcgagaaggatcttcctgacaagactgagcgtgtg
atcaagtgcaacttctctaccctccaggcgaagttgtacaagcaactggtcactcacaac
cggctcatggtcagcgatggcaagggtggaaagactggtatgcgcggtttgagcaacatg
ttgatgcagttgcgaaagctgtgcaaccatcctttcgtgtttgaagaggttgaggatgtc
atgaacccaaccaagggtaccaacgatcttctatggcgcgcggccggcaaatttgaactg
ctcgaccgaattctacccaagttccaggccaccggtcatcgtgtccttatgttcttccag
atgactcagattatgaacattatggaagattatctacggttacgaggcatgatgtatctg
cgtctggacggagccaccaaagcagacgaccgatcggatcttctacggcttttcaatgcc
cccgactcaccgtacttctgcttcttgttgtccacgcgtgctggtggtcttggactgaac
ctccaaaccgccgatactgttatcatttacgactcggattggaatcctcatcaggatttg
caagctcaggatcgtgcgcatcgtattggtcagaagaacgaagtccgcattctgcgtctc
atcacatccaactcagtcgaagagaagattctcgagcgagccaactacaagcttgacatg
gatggcaaggttatccaagctggtaaattcgacaacaagtccaaggacgacgaacgagat
gccatgttgcgaatcatgttggagtctgctgaagcggccgagagtctcgagcaagaggag
atggacgatgacgacttgaaccagattatgatgcgtcatgaccacgagctggttaccttc
caagagatggatcgcaagcggatagcagaagacccttacggtcctggtaagcctctcggt
cgtttgatcggcgagagtgagctgccagatatctacctgaacgaagaggcgcctattgtc
gacgagaaggatgacacacctgccggtcgtggtgctcgcgagcgtactcgggtcaagtat
gacgatggtcttactgaggagcagtggcttgaggccgtcgacaacgacgaggacaccatt
gaagccgctatcgcccgcaaggaagccaaggttgccaagaggggtaggaagagcggtggt
aggcccgaggaggactcgcctgtaccttcgcgcgctagctctgaggagccgatgcccaag
aagcgaggccgcaagccgaaggcggagaagcgtaaagctgatgaagcctctctcgacgct
gaactcgcaccacggaaacgtggccggcctgcacccaccaaagacatgctgcatccagat
caacgagcatcgcttcaaaaggttgttaacatcgtctatgaagctctcaatgacctcgag
gaagagtcacaggaccccaacattccgaaccggggcatcatcgaccccttcatcgagcta
ccagacaagtgggactacccagactactaccagctgatcaagaaccccatctgcatgaag
caaatcgagaagaagatcaacaagaaggagtaccagtcggtcaagcagttccgccaagat
ctgggcttactatgcaacaactgccgtacatacaacgaggacacttccctgctctttgcg
gacgccaacctcattgagcagactgcgctcgacaagcttagggaagctacggcagagttt
cctgagtggcaagattacgacgatggtggtagtgtacatggtggtgctagcacggctatg
acgagtgcggtcggtacaccgcggggtggtctttga
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