Pyrenophora tritici-repentis: 6339552
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Entry
6339552 CDS
T10215
Symbol
PtrM4_014620
Name
(RefSeq) SKP1, SCF ubiquitin ligase, SKP1 component
KO
K03094
S-phase kinase-associated protein 1
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03083
Polycomb repressive complex
ptrr04111
Cell cycle - yeast
ptrr04120
Ubiquitin mediated proteolysis
ptrr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
6339552 (PtrM4_014620)
04120 Ubiquitin mediated proteolysis
6339552 (PtrM4_014620)
09126 Chromosome
03083 Polycomb repressive complex
6339552 (PtrM4_014620)
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
6339552 (PtrM4_014620)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptrr04131
]
6339552 (PtrM4_014620)
04121 Ubiquitin system [BR:
ptrr04121
]
6339552 (PtrM4_014620)
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6339552 (PtrM4_014620)
Membrane trafficking [BR:
ptrr04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
6339552 (PtrM4_014620)
Ubiquitin system [BR:
ptrr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
6339552 (PtrM4_014620)
Cul7 complex
6339552 (PtrM4_014620)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
6339552 (PtrM4_014620)
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
6339552 (PtrM4_014620)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
6339552
NCBI-ProteinID:
XP_001931415
UniProt:
B2VUU5
LinkDB
All DBs
Position
1:3706416..3706986
Genome browser
AA seq
170 aa
AA seq
DB search
MANTTTASSEKSISITTSDGITMNVPRPVAERSILIKNLLEDLGGESEESIPIPNVNEAV
MKKVLEWCEHHRSDPPATQDDDSDSRKKSTDIDEWDQKFMQVDQEMLFEIILAANYLDIK
ALLDVGCKTVANMIKGKSPDEIRKTFNIQNDFTPEEEEQIRRENEWAEDR
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggccaacactaccacagcctcgagcgaaaagagcattagcatcactaccagtgatggt
atcaccatgaatgtcccgcgtcccgttgccgagcgctccattctcatcaagaacttgctc
gaggaccttggtggtgaatccgaggaatccatccccatccccaacgttaacgaggcggtc
atgaagaaggtgcttgagtggtgtgaacaccaccgcagtgacccccccgccacgcaagac
gacgactcggactcgcgcaagaagtcgaccgacattgacgagtgggaccagaagttcatg
caggttgaccaagagatgttgttcgagatcattctcgccgcgaattacctcgacatcaag
gcactgctcgacgtcggctgcaagacagtcgcgaacatgatcaagggcaagtcccctgat
gaaatccgcaagactttcaatatccagaacgacttcacgcctgaggaggaggagcagatc
cgtcgcgagaacgagtgggccgaggaccgttag
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