Pyrenophora tritici-repentis: 6339561 Help Entry 6339561           CDS       T10215                                  Symbol PtrM4_013030 Name (RefSeq) RNA-binding protein (RRM domain)   KO K12881   THO complex subunit 4 Organism ptrr  Pyrenophora tritici-repentis Pathway ptrr03013   Nucleocytoplasmic transport ptrr03015   mRNA surveillance pathway ptrr03040   Spliceosome Brite KEGG Orthology (KO) [BR:ptrr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6339561 (PtrM4_013030)   09122 Translation    03013 Nucleocytoplasmic transport     6339561 (PtrM4_013030)    03015 mRNA surveillance pathway     6339561 (PtrM4_013030)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ptrr03019]     6339561 (PtrM4_013030)    03041 Spliceosome [BR:ptrr03041]     6339561 (PtrM4_013030) Messenger RNA biogenesis [BR:ptrr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      6339561 (PtrM4_013030)     TREX complex      6339561 (PtrM4_013030) Spliceosome [BR:ptrr03041]  Complex C   Other components    EJC/TREX     6339561 (PtrM4_013030)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     6339561 (PtrM4_013030) SSDB OrthologParalogGFIT Motif Pfam:  RRM_1 FoP_duplication RRM_occluded RRM_PARP14_3 DUF1633 RRM_MUD2_C Motif Other DBs NCBI-GeneID:  6339561 NCBI-ProteinID:  XP_001931265 LinkDB All DBs Position 1:<3279715..>3281209 Genome browser AA seq 253 aa AA seqDB search MSSNKMEQSLDDILKASKTSRRGRAGRRSGAGRPATAPAPVGGVSKSTKQGKQAKATPTA PAASLSGETKIMVSNLPRDIDQVQLQEYFVSAVGVGRPKKVLLQYDAAGRSVGSATVIFN RHDQATKATAALDGVKIDGRPVRVEILVSASAIPATTRSTSLADRVTQAKKDKPKPATAE KAAAGAARGRGQTRGRGKGRGGRDARPKKKTVEELDAEMADYFPGGETSNAANGVEVAQV TAGGDTAMDDEML NT seq 762 nt NT seq  +upstreamnt  +downstreamnt atgtcttcgaacaagatggagcagagcctcgacgacatccttaaggcttccaagacctcc cgccgtggccgtgctggacgccgctctggtgctggacgtcccgccactgctcccgcccct gtcggaggtgtttccaagtcgaccaagcaaggcaagcaggccaaggctacaccgaccgcg cccgcagcctctctcagcggtgagacgaagatcatggtatctaacttgccacgggacatc gatcaagtccaactccaggaatactttgtttcagccgtcggcgtgggccgaccgaagaag gtcctcttgcaatatgacgccgctggccgcagtgtaggcagtgcaactgtcatcttcaac aggcacgaccaagctacgaaggcaactgccgcactggatggtgtcaagatcgacggtcgc cctgttcgtgtcgagatcctcgtcagcgccagcgccatcccggccacaacccgttcgact tctcttgccgaccgtgttacccaagcgaaaaaggacaagcccaagcctgctacagctgaa aaggccgccgctggtgccgcacgcggccgtggtcaaacacgtggtcgcggaaagggccgt ggaggtcgcgacgctcgtcccaagaagaagacagtcgaggagctcgatgctgagatggcc gactacttccctggaggcgagaccagcaatgctgccaatggcgttgaagttgcccaggtc accgccggcggtgacactgccatggacgacgagatgctttga

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