Pyrenophora tritici-repentis: 6339766
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Entry
6339766 CDS
T10215
Symbol
PtrM4_020270
Name
(RefSeq) G-patch domain protein (TFIP11)
KO
K13103
tuftelin-interacting protein 11
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
6339766 (PtrM4_020270)
Spliceosome [BR:
ptrr03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
6339766 (PtrM4_020270)
Other components
Complex C specific factors
6339766 (PtrM4_020270)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
ABC_tran_CTD
MbeD_MobD
Motif
Other DBs
NCBI-GeneID:
6339766
NCBI-ProteinID:
XP_065965594
UniProt:
A0A2W1GKL6
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All DBs
Position
1:<5174284..>5176392
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AA seq
660 aa
AA seq
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MDTDGGKRKHSFRQQPNKRAKADDGSALKAGFGAKMLAKMGYKGEGGLGKEGAGISEPIQ
VVNRGTKGGIGIVAEKSEQQRREEKRKAEANGENPSAKEDASIIDATTGASTPTSGVSLR
GADIIPFENSLQARVRRDLNSFSEAFEQLQVESQAIPPQKYALQKELEALERQMDELEDL
QARIESLRTGTFEAVCEGLKSLRAAYPSKSLHRESIAVIHPHFSRKIASWEPLEDALEVV
AAAFSEMADIIQPRSRRIVSQTYTHPSEALVSSNTADEEEDKIKRGTSSSYESMMLKLWL
PTVSSAVTQWDVKNPQPMVHLVQVWTPVLPPFIAKRVLEQVTRKLSTSIHEWNPRKFKKS
PHTWIVEWLPFLRPSDLDPKGSGLVAEIKRKIRHALQSIDLSKGPLPGMDQWRKVFGKAE
FDHLLTSHLVPRFAAYLRDNFEIDPAEPDLAPLEAVFAWKGLVSNEVIGELLRSQFFPKF
LEILHQWLSSEEVIFEEVGTWLAWWKNDIIKDDINNLPSVASGWNEAYFLFNQAFDLGEA
RMTDLPAPQVEGTEASPDTTQFSKSVKKEPPRPAPQVEEATLKDILEEFCAEENLLLIPL
REAHTQTGLPLFRITASATGRGGAVAYLRGDVLWVQNKKDKSVWERTELDESLVAKAEGK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacgggggcaaacggaagcacagcttcagacagcagccgaacaagcgggca
aaggcagacgatggcagcgcactcaaggccggcttcggcgccaagatgctggcgaagatg
ggttacaagggcgaaggtggactgggaaaagagggcgctggtatctcggaacctatccag
gtcgtgaatcgcggcaccaagggcggcattggcattgtcgcagaaaagagcgagcagcag
aggcgggaggagaagcgcaaggctgaagcaaacggcgaaaacccctcggccaaagaagac
gcttccatcatcgatgccacgacgggcgcatcgactcctacctcgggcgtgtctctccgt
ggagccgacatcatcccatttgaaaactccctgcaagcacgcgtccgacgagatctcaac
agtttctccgaagcattcgaacaattgcaggttgagtcgcaggccattccgccccagaag
tatgcgctgcagaaggagctcgaggcgttggagcgacaaatggatgagttggaggatttg
caggcacggatcgagtcgttgcgtacgggcacattcgaggccgtctgtgaaggattgaag
agcctgcgtgctgcctatccatcaaaatcattgcatcgtgaatccatcgcagttatccat
ccacacttttcgaggaagatcgcgtcctgggagccgcttgaagatgcgcttgaggttgtc
gcagcagcattctccgaaatggccgacattatacagccgcggagcaggaggatcgtgtct
cagacttacacgcatccctcggaagcattggttagtagcaacacagccgacgaagaagag
gacaagataaagcgaggaacttcgtcgtcatacgagtctatgatgctaaagctctggcta
cccactgtgagctctgcagtgacgcagtgggatgtcaagaacccacagcccatggtccac
ttagtgcaagtctggacgccagttttaccaccattcatcgccaagagggtgctcgaacag
gtcacgcgaaagctgtccacttcgatccacgagtggaacccacgaaaattcaaaaagagt
ccacatacgtggattgtggagtggctaccattccttaggccgtctgacctcgaccccaag
ggatcgggacttgttgctgaaatcaagcgcaagattagacatgcattgcagtccatcgat
ctctccaaaggcccattaccaggaatggaccaatggagaaaggtctttgggaaggcagag
tttgatcatctcctcacctcccatttggttccacgctttgctgcctatctgcgagacaac
ttcgagattgaccctgccgaaccagacttggcaccgctggaggctgtctttgcctggaag
ggcctcgtctcgaacgaggtcattggagagctgttgagatctcaattcttccccaagttc
ctcgaaattctccatcagtggctttcgagcgaggaggtcatttttgaagaagtcgggact
tggcttgcgtggtggaaaaacgatattatcaaagatgacatcaacaatctgccttcggtt
gcatcgggttggaacgaagcgtacttcctatttaaccaggcattcgatcttggcgaggcg
agaatgacagatctgcctgctcctcaggtggaaggcacagaagcctcgccagatacgact
caattctccaaatcggtcaaaaaagagccaccacgcccagcaccacaagtcgaggaggcg
actctcaaggatatacttgaggaattctgcgccgaagagaatttgctcctgataccactg
cgcgaagctcacacccagaccggcttaccgctattccgaatcacagcaagcgctacagga
cgtggaggcgccgtggcttacctcagaggcgatgttctgtgggtgcagaataagaaagac
aagagcgtctgggagcgtaccgaattggacgaatcactcgttgcaaaggccgaagggaag
tga
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