KEGG   Pyrenophora tritici-repentis: 6339776
Entry
6339776           CDS       T10215                                 
Symbol
PtrM4_019360
Name
(RefSeq) WD40 repeat protein
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
ptrr  Pyrenophora tritici-repentis
Pathway
ptrr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ptrr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    6339776 (PtrM4_019360)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptrr04121]
    6339776 (PtrM4_019360)
   03036 Chromosome and associated proteins [BR:ptrr03036]
    6339776 (PtrM4_019360)
Ubiquitin system [BR:ptrr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     6339776 (PtrM4_019360)
Chromosome and associated proteins [BR:ptrr03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     6339776 (PtrM4_019360)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_C WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_SCAP EIF3I Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_EML F-box-like Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 F-box WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_NWD2_C WDR90_beta-prop_4th Beta-prop_Nup120_160 VPS8_N Beta-prop_VPS8
Other DBs
NCBI-GeneID: 6339776
NCBI-ProteinID: XP_065965559
UniProt: A0A2W1FWA7
LinkDB
Position
1:4897814..4900605
AA seq 849 aa
MAGPPGMPDTQFSTPPYHQHPFRPASSMSANRFDEGYSEETRSQTENDTIMRGDARLSDG
ETEPDAPFTLPDWVLALSENERSEFAYAILRSLRTSSIAGIVQKLNPLLHLDPVIHLPPE
ITFQILSYLDPETLLRASTLSRSWRERVLDSPLWKLLFRLEGWNSNFPQVRAYEEAQRQK
RAEFREKERKTRHRASEDTDYGKPSHKKRVRERPLFGDGQALENSIDSTLEPLSINSSSG
SAWDEQHGAVEADSPSVKSEDKMEGISFHGASPLASPTEIGRRERRPGVPSLPDETSFTT
TSGEASGPPIHPSLLLPGPDAKINWQYLYKQKRRLEDNWSTGRYTNFQLPHPNHPEEAHT
ECVYTIQYSGKYLVSGSRDKTIRVWDLDTLRLVHKPLVGHSASVLCLQFDERPEQNIVVS
GGSDCRVILWNFKTGRIIKEIEKAHSESVLNLRFDDRYLVTCSKDKTIKVWNRKEMMPTD
DTYPSSTMKSGARFPSYIINMQEHVESQHLHFKPLLPYSLIMTLEGHGAAVNAIQILDGQ
IVSASGDRSVKCWDVRTGACTRTFSGHTKGIACVQFDGRRIVSGSSDESVRIFDRATGAE
VACLNGHSNLVRTVQAQFGDLPGNEEELEAEARAVDRDYFEAQAKGLVSTQGLSRAERRA
RNAGSRDPSKVFAYGAKLPPGGGGTKWARIVSGSYDETVIIWKRGPDGSWEKSQTLLQND
AVRAAGGRPRRPVVQAAANANPAGVQNNQQATAQGPAQQNHFQALAQQAQAQAQAAQNLA
QQAHALHVASQTTHGTTINGVPTNAAGNNAAFDARRIICCSQDPTIVGWDFANGDRDIIV
ASQFFGDSY
NT seq 2550 nt   +upstreamnt  +downstreamnt
atggcaggtcctcccggcatgcccgacacccaattttccactccgccataccaccaacac
cctttccgtcccgcctcttcaatgagcgcaaaccggttcgacgaaggatattccgaggaa
acgaggagccagactgagaacgacaccattatgcgcggcgacgcacggctgagcgacggc
gagacggagcctgacgcgccctttacccttccggactgggtcctggctctgagcgagaat
gagcgaagtgaattcgcgtatgccattctgcgctccctacggacatcatcaatcgccggc
atcgtccaaaagctgaatccactcctgcatctcgatcccgtcatacaccttccacccgaa
atcactttccagatactctcgtatctcgatcccgaaacattgttacgcgcatcgaccctg
tctcgatcgtggagggagcgggtactcgacagccccctgtggaagctgctcttcaggcta
gaaggctggaactccaactttccccaagttcgcgcatatgaagaggcccagcggcagaag
cgcgctgaatttagagagaaggagcgcaagacgcggcatagagcatccgaagacaccgat
tacggcaagccatcccacaagaagcgcgtgcgggaacgaccgctattcggtgacggacaa
gcactagagaacagcatagacagcacattagagccgctctccatcaatagctcatcagga
agtgcctgggatgagcaacatggcgcagtcgaggctgacagcccttccgtcaagtcggag
gataagatggagggtatctccttccacggtgcatcgcccctagcctcacctaccgagatc
gggcgtcgtgaaagaaggccgggtgtccccagcctgcctgacgagacatcgttcacgacc
acatcaggcgaagcaagtggtcctccaatacacccctcgcttttgctccccggaccagac
gctaagatcaactggcaatacctttacaagcaaaagagacgattagaagacaactggagc
accggacgctacacaaatttccaacttccacacccaaatcaccctgaagaggctcatacc
gagtgcgtgtatactatacagtactcggggaagtacctggtcagtggcagccgcgacaag
accatccgggtctgggatctcgacactctccgcttagttcacaagccgctcgttggccac
tcggcttccgtcttgtgcttgcaatttgatgagcgccctgagcaaaacattgttgtctct
ggtggtagtgattgcagagtcattctctggaatttcaaaacgggacgcatcatcaaggag
attgagaaagcacattccgagtctgttctgaatctgaggtttgacgatcgctatctggtt
acctgctcaaaagacaagactatcaaagtatggaatcgcaaagagatgatgccgacagac
gacacctacccatcttcgaccatgaagtcgggtgcccgattcccttcctacataatcaac
atgcaagaacatgttgagagccaacacctgcacttcaagccacttcttccatacagcctt
ataatgaccttggagggccacggtgccgctgtgaatgcaattcaaattctcgatggacag
atcgtgtcagcatcgggggataggagcgtcaaatgctgggacgttcgaacaggcgcatgt
actcggacattttcaggtcacaccaaaggtattgcttgtgtccaattcgatggacgccgc
atcgtcagtggaagttcagacgaaagtgtacgcatattcgaccgagctacgggggcagaa
gtcgcttgtttgaatgggcatagtaatcttgtgcgcactgtacaagcccagtttggtgat
ctccctggtaatgaggaagagcttgaagctgaagcacgtgctgttgatcgagactacttt
gaagcgcaagcaaaaggcctggtatccacccaaggtctaagcagggcggagcggcgcgct
cgtaacgctggctcccgtgacccatccaaagtcttcgcctatggagctaagctaccacct
ggtggtggaggcaccaagtgggcgcgcatcgtttctgggtcttatgatgagacagtcatc
atctggaaaaggggacccgacggatcttgggagaagtctcaaacactattacagaacgac
gcggtccgagctgctggtggacgacctaggaggcctgttgtacaagctgcagccaatgca
aacccggctggcgtccaaaacaaccaacaggcaactgctcaaggtcctgcgcaacagaat
cacttccaggcgttggcgcaacaggcccaagcccaggcccaagccgctcagaatctagca
cagcaagcccacgcccttcacgttgcctcacaaacaacgcacggcacgacaatcaacggt
gttcctacaaacgcagcagggaacaacgcagcctttgatgcgcgtaggatcatttgctgc
agccaggatcccacgattgtcggctgggattttgccaatggcgatcgggatatcatcgtc
gctagccagttcttcggcgactcttattag

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