Pyrenophora tritici-repentis: 6339776
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Entry
6339776 CDS
T10215
Symbol
PtrM4_019360
Name
(RefSeq) WD40 repeat protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
6339776 (PtrM4_019360)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptrr04121
]
6339776 (PtrM4_019360)
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6339776 (PtrM4_019360)
Ubiquitin system [BR:
ptrr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
6339776 (PtrM4_019360)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
6339776 (PtrM4_019360)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_C
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_SCAP
EIF3I
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
F-box-like
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
F-box
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_NWD2_C
WDR90_beta-prop_4th
Beta-prop_Nup120_160
VPS8_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
6339776
NCBI-ProteinID:
XP_065965559
UniProt:
A0A2W1FWA7
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Position
1:4897814..4900605
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AA seq
849 aa
AA seq
DB search
MAGPPGMPDTQFSTPPYHQHPFRPASSMSANRFDEGYSEETRSQTENDTIMRGDARLSDG
ETEPDAPFTLPDWVLALSENERSEFAYAILRSLRTSSIAGIVQKLNPLLHLDPVIHLPPE
ITFQILSYLDPETLLRASTLSRSWRERVLDSPLWKLLFRLEGWNSNFPQVRAYEEAQRQK
RAEFREKERKTRHRASEDTDYGKPSHKKRVRERPLFGDGQALENSIDSTLEPLSINSSSG
SAWDEQHGAVEADSPSVKSEDKMEGISFHGASPLASPTEIGRRERRPGVPSLPDETSFTT
TSGEASGPPIHPSLLLPGPDAKINWQYLYKQKRRLEDNWSTGRYTNFQLPHPNHPEEAHT
ECVYTIQYSGKYLVSGSRDKTIRVWDLDTLRLVHKPLVGHSASVLCLQFDERPEQNIVVS
GGSDCRVILWNFKTGRIIKEIEKAHSESVLNLRFDDRYLVTCSKDKTIKVWNRKEMMPTD
DTYPSSTMKSGARFPSYIINMQEHVESQHLHFKPLLPYSLIMTLEGHGAAVNAIQILDGQ
IVSASGDRSVKCWDVRTGACTRTFSGHTKGIACVQFDGRRIVSGSSDESVRIFDRATGAE
VACLNGHSNLVRTVQAQFGDLPGNEEELEAEARAVDRDYFEAQAKGLVSTQGLSRAERRA
RNAGSRDPSKVFAYGAKLPPGGGGTKWARIVSGSYDETVIIWKRGPDGSWEKSQTLLQND
AVRAAGGRPRRPVVQAAANANPAGVQNNQQATAQGPAQQNHFQALAQQAQAQAQAAQNLA
QQAHALHVASQTTHGTTINGVPTNAAGNNAAFDARRIICCSQDPTIVGWDFANGDRDIIV
ASQFFGDSY
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcctcccggcatgcccgacacccaattttccactccgccataccaccaacac
cctttccgtcccgcctcttcaatgagcgcaaaccggttcgacgaaggatattccgaggaa
acgaggagccagactgagaacgacaccattatgcgcggcgacgcacggctgagcgacggc
gagacggagcctgacgcgccctttacccttccggactgggtcctggctctgagcgagaat
gagcgaagtgaattcgcgtatgccattctgcgctccctacggacatcatcaatcgccggc
atcgtccaaaagctgaatccactcctgcatctcgatcccgtcatacaccttccacccgaa
atcactttccagatactctcgtatctcgatcccgaaacattgttacgcgcatcgaccctg
tctcgatcgtggagggagcgggtactcgacagccccctgtggaagctgctcttcaggcta
gaaggctggaactccaactttccccaagttcgcgcatatgaagaggcccagcggcagaag
cgcgctgaatttagagagaaggagcgcaagacgcggcatagagcatccgaagacaccgat
tacggcaagccatcccacaagaagcgcgtgcgggaacgaccgctattcggtgacggacaa
gcactagagaacagcatagacagcacattagagccgctctccatcaatagctcatcagga
agtgcctgggatgagcaacatggcgcagtcgaggctgacagcccttccgtcaagtcggag
gataagatggagggtatctccttccacggtgcatcgcccctagcctcacctaccgagatc
gggcgtcgtgaaagaaggccgggtgtccccagcctgcctgacgagacatcgttcacgacc
acatcaggcgaagcaagtggtcctccaatacacccctcgcttttgctccccggaccagac
gctaagatcaactggcaatacctttacaagcaaaagagacgattagaagacaactggagc
accggacgctacacaaatttccaacttccacacccaaatcaccctgaagaggctcatacc
gagtgcgtgtatactatacagtactcggggaagtacctggtcagtggcagccgcgacaag
accatccgggtctgggatctcgacactctccgcttagttcacaagccgctcgttggccac
tcggcttccgtcttgtgcttgcaatttgatgagcgccctgagcaaaacattgttgtctct
ggtggtagtgattgcagagtcattctctggaatttcaaaacgggacgcatcatcaaggag
attgagaaagcacattccgagtctgttctgaatctgaggtttgacgatcgctatctggtt
acctgctcaaaagacaagactatcaaagtatggaatcgcaaagagatgatgccgacagac
gacacctacccatcttcgaccatgaagtcgggtgcccgattcccttcctacataatcaac
atgcaagaacatgttgagagccaacacctgcacttcaagccacttcttccatacagcctt
ataatgaccttggagggccacggtgccgctgtgaatgcaattcaaattctcgatggacag
atcgtgtcagcatcgggggataggagcgtcaaatgctgggacgttcgaacaggcgcatgt
actcggacattttcaggtcacaccaaaggtattgcttgtgtccaattcgatggacgccgc
atcgtcagtggaagttcagacgaaagtgtacgcatattcgaccgagctacgggggcagaa
gtcgcttgtttgaatgggcatagtaatcttgtgcgcactgtacaagcccagtttggtgat
ctccctggtaatgaggaagagcttgaagctgaagcacgtgctgttgatcgagactacttt
gaagcgcaagcaaaaggcctggtatccacccaaggtctaagcagggcggagcggcgcgct
cgtaacgctggctcccgtgacccatccaaagtcttcgcctatggagctaagctaccacct
ggtggtggaggcaccaagtgggcgcgcatcgtttctgggtcttatgatgagacagtcatc
atctggaaaaggggacccgacggatcttgggagaagtctcaaacactattacagaacgac
gcggtccgagctgctggtggacgacctaggaggcctgttgtacaagctgcagccaatgca
aacccggctggcgtccaaaacaaccaacaggcaactgctcaaggtcctgcgcaacagaat
cacttccaggcgttggcgcaacaggcccaagcccaggcccaagccgctcagaatctagca
cagcaagcccacgcccttcacgttgcctcacaaacaacgcacggcacgacaatcaacggt
gttcctacaaacgcagcagggaacaacgcagcctttgatgcgcgtaggatcatttgctgc
agccaggatcccacgattgtcggctgggattttgccaatggcgatcgggatatcatcgtc
gctagccagttcttcggcgactcttattag
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integrated database retrieval system