Pyrenophora tritici-repentis: 6340180
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Entry
6340180 CDS
T10215
Symbol
PtrM4_012180
Name
(RefSeq) TolA, Membrane protein involved in colicin uptake
KO
K18723
nucleoporin GLE1
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03013
Nucleocytoplasmic transport
ptrr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6340180 (PtrM4_012180)
03015 mRNA surveillance pathway
6340180 (PtrM4_012180)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6340180 (PtrM4_012180)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6340180 (PtrM4_012180)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
6340180
NCBI-ProteinID:
XP_065965246
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Position
1:3047139..3048815
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AA seq
558 aa
AA seq
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MPARSGTSSSSMHTSTSFSSSLVETSPSRHSPNRSNLRPHRESLTRDPYGSPAHKLALEF
NLRLSISDREFNEKLDKAAAVRAEQHQQQLAYAAEEHERVYRSAKLELERQALEEEQARL
RHEENQKREIERLKQEKAREQAEAQRRALEARQREEEAARQAAEHQKKLQEADARIKARK
EQEAAAERQKKETEEAGRKAAEAAAAAEKARQQVPQQVPQQAPQQAPAAPTQAAAPKPGQ
APAANVDQIHAKYLQLHQRMKEFRKAFWEEHKKPTSPLKGPVGDARRALRTRLGQINVDR
TDSTAAIKRLRTECFDVALNTPGPMIDIRQYIVSHQLPQLANQNQAAYPAFLLYVWICFE
KFLIGQFEKEAANPDGRIIQEIGLIAASLFGDQKYMWNGVPLTDIVLAKLHKACPPLFGI
RGTMDTQEGRLRLGWRVHSTTETYAQRMRGIGAGYASMSLRSFASKTPAIAISEYWRAIA
SIVNTPPDQLWPGHFAILSGLIRDYHKKFIQFYGVPARAVLRRAVIDLPMRAPDRCKDAA
STIAVLSESWKRENFSLD
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgatccggcacctcgtcctccagcatgcacacgtccacgtcgtttagctcg
agtttggttgagacatctccgtcacgtcattcgcccaatcgaagcaatcttcgtcctcat
cgagaatctttgacgcgcgatccctatggcagtcctgcacacaagctggccctcgaattc
aacctccgtctgtccatatccgaccgtgagttcaacgagaagctagacaaagctgctgct
gtgcgcgccgaacagcaccagcagcaactcgcctatgctgccgaggagcacgaacgcgtc
tatcgcagcgccaaactcgagcttgaacgccaggcccttgaagaggagcaggcccgtcta
cgccatgaggagaaccagaagagggaaattgagcggctgaagcaggaaaaagcccgcgaa
caagccgaggcacagcgaagagcgctcgaggcccgacaacgcgaagaagaagccgcccgt
caggctgcagagcaccagaagaagctacaggaggctgatgctcgcatcaaggctcggaaa
gagcaagaagccgccgctgaacgccaaaagaaggagactgaggaggcgggtcggaaagct
gccgaggcggctgcggctgcagaaaaggcccgtcaacaggtgccacagcaagtgccacag
caagcgccacagcaagcgccagctgcgcccacacaagctgcagccccaaagcctggacag
gcacccgctgccaatgtcgaccagatccacgccaagtaccttcaactgcaccagcggatg
aaggagttccgcaaagccttttgggaggagcacaagaaacccacctcgcccctcaagggc
cccgttggcgatgcgagacgcgctctccgcactcgtctaggtcagatcaacgttgaccga
acagacagcaccgccgccatcaagcgtctccgaacagaatgcttcgatgtcgccttgaac
accccaggtcccatgattgacatccgccaatacattgtctcacaccagctgcctcagcta
gccaaccaaaaccaagctgcataccccgccttcctcctctacgtctggatctgctttgaa
aagttccttatcggtcagtttgaaaaggaggctgccaatcccgatggacgcatcatccag
gagattggtcttatagcagctagtctgtttggcgaccaaaagtacatgtggaatggagtt
cctctcactgatattgtgcttgccaagctgcacaaggcttgcccgcctctctttggcatc
cgcggcacaatggacacccaagaaggccggctgcggctaggctggcgggtccattctaca
acggagacatacgctcaacgcatgcgcggtattggcgctggctatgcttccatgtcgctc
cgctcgttcgcatccaagacgcccgcgatagcaatctccgagtactggcgcgctattgcc
tccatcgtcaatactccacccgaccaactctggcctggacactttgctatcctcagcggc
ttgattcgcgactaccacaagaagttcatccagttctacggcgtccccgcacgtgcagta
ctacgtcgcgctgttatcgatctccctatgcgtgcacctgaccgctgcaaggatgccgca
agcaccattgctgtgttgagcgagagctggaagagagagaatttctcattggactag
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