Pyrenophora tritici-repentis: 6340369
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Entry
6340369 CDS
T10215
Symbol
PtrM4_010040
Name
(RefSeq) U4-U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6340369 (PtrM4_010040)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
6340369 (PtrM4_010040)
Spliceosome [BR:
ptrr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
6340369 (PtrM4_010040)
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
6340369
NCBI-ProteinID:
XP_001930999
UniProt:
B2VSG2
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All DBs
Position
1:2494692..2496388
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AA seq
548 aa
AA seq
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MATLEQELLADFAEDEDLQDLENDFGGGSGEDDDMVDEEAEYRQKEKDNDSKAEADIKSA
QQLKINLESVLQRIEEIKDKMDIVEGESFEDSPDYKLLTEANEYSTQIDGEIATVHKFIR
DHYSAFFPHLEDLLKNPVVYARACLVIGGGPLDNIKNITPKLRGIPELDPALIMVVEIEA
TRVEGRLLDEAELSLISDACHLLLELNDAKKVILQFVESRTAVFAPNLTALIGSLTAAHL
ISYSGGITNLAKTPACNIAPLGSTKVSGATIGLSNIGLRHEGFLYHSDIVQNVRQDLRKQ
ALRIVSGKVILAARVDAHSGSHNADIGMDLRKECEKRIDRLSEIPANQKGQRALPVPDEK
PSRKRGGRRARKAKEATAMTEIRKAQNRMTFGKEEKEVGYGDSVKGMGMIGATDTGRLRA
QQIDPKTRAKLSKKNPGWGGDTTLGAASSLKGFGAGGTATSLRAQGLRTGGVGLGGGAGT
NSIAFTPVQGLELVDPKAREEMNRKRKADDDRWFKGGAFTQLNGSSSKVDAGGFKVPALP
MKKPKTDS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctagaacaggaacttctcgccgactttgctgaggatgaagatcttcaggat
cttgagaatgatttcggaggcgggtctggcgaggacgatgacatggtagacgaggaggcc
gagtacaggcagaaagagaaggacaatgacagcaaagctgaagccgacataaaatccgcc
cagcaactgaagatcaatctcgaatctgtccttcagcgcattgaagaaatcaaggacaag
atggacattgtggagggtgagtcttttgaggactcgccggattacaagctcctcacagag
gccaacgagtactctacacaaatcgacggcgaaatcgctaccgtacacaagttcattcgc
gaccactactcggcctttttcccgcatttggaagatctactcaaaaaccccgtcgtctac
gcaagggcatgtttggttatcggtggtggacctctggacaacatcaagaacattacgcca
aagttgcgaggaattcctgaactcgatcctgccctgatcatggtagtggaaattgaagcc
acgcgtgtcgaaggaaggctgcttgatgaagctgagctctctctcatatcagatgcttgc
cacctgttgcttgagttgaatgacgcgaagaaagtgattctgcaattcgtcgagtctcgc
acagccgtttttgcgcccaaccttaccgcattgattggcagtctgacagcagctcatctg
atctcatattcaggaggtattaccaaccttgcgaagacgcccgcttgcaacatcgctcct
ctaggttcgaccaaggtctccggtgctaccatcggtctttccaacatcggcttgagacat
gagggctttctataccacagtgatattgtacagaacgtgaggcaagatcttaggaaacag
gctttacgtatcgtctccggcaaagttattctggcagcacgagtcgacgctcactccggc
tctcacaacgccgacattggcatggatctgagaaaggaatgcgaaaagcgcatcgacaga
ctcagtgaaatacccgcaaaccaaaaaggccaacgagccctgcctgtccctgacgaaaag
ccctcccgcaagcgtggtggcagacgtgccagaaaggccaaagaagcaaccgcaatgacg
gagatccgtaaagcccagaaccgcatgacgtttggcaaggaagaaaaggaagttggctac
ggcgactcagtcaagggaatgggcatgattggagcaaccgacacaggccgtctccgcgcg
caacaaatcgaccccaaaacccgcgccaaactttcaaagaagaacccaggttggggcggc
gataccaccctcggcgctgcttcctcgctcaaaggtttcggtgcaggtggtacggcgacg
agtctgcgcgctcagggcttgcggactggtggtgtgggcctcggcggtggcgcaggaacg
aattcgattgccttcacgcctgttcagggtcttgagctcgtagatcccaaggcaagggaa
gagatgaatcggaagcgcaaagcggatgatgatcgctggttcaaaggtggagcattcacg
cagctcaatggaagcagttccaaagttgacgctggcgggttcaaggtccctgcgctgccg
atgaagaagcctaagacggattcttag
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