Pyrenophora tritici-repentis: 6340385
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Entry
6340385 CDS
T10215
Symbol
PtrM4_010110
Name
(RefSeq) SNF5 multi-domain protein
KO
K11770
chromatin structure-remodeling complex subunit SFH1
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrr03021
]
6340385 (PtrM4_010110)
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6340385 (PtrM4_010110)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
6340385 (PtrM4_010110)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
6340385 (PtrM4_010110)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
GATA
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
6340385
NCBI-ProteinID:
XP_001931005
UniProt:
B2VSG8
LinkDB
All DBs
Position
1:complement(2513079..2514988)
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AA seq
598 aa
AA seq
DB search
MFTTTGKTAPPQAFMSSYAPRLRSHGNSLISPIVPPSNTLPAPRVTKRGTAVLSYAEDAY
DDDDFEDSDRPRRATGLRSVQKADPSSVDQQAQIAALGEELTAPIDTQGIWRDWMGRPKR
NLTEKQVQTQSVLPVTLIPIRIDMDIQSFRPEAPLPTPSNARDFGINENLPAYKQPDVTP
AYRLKDSFLWNLHEALTTPDQFAKQFVDELDLPTERKPMIISQIANQIRQQLEEYAGVAL
HPLFHSTASPAVQGVQSIQATGAKVTLPERSRDGTSTPVVPATNGVSTPVTNGASHTEGA
QTPVGIPNGISAAATALPSEELHNPDDTYRCIVTLNINLMNRLYTDKFEWSLLHPPGFAE
MFAKTTCADLGLSGEWVNAMTHSIYEAVLRLKKEACENGGLVGDGEIDNDAVEPTIGAGW
RYDQEHLCDEWEPKVEILSPEEIEKREGDRERQIRRLRRETARFSSTTNMTGAPANEFFN
NIEGQENMGRGERSKKKRRFRSLSPVGRGTPGAGGGSGYGGQDGGLQEGERQTWRCAHCW
VWGTAVWAVRDGPKGPRTLCNNCGYLYERDKKLPPWSENLFYSERPLHEVQQPYRSQR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgaccacgggaaagacggcgccgccgcaggcattcatgtctagttatgcgccg
cgcctacgtagccacgggaattcactcatatcgcccatcgtcccgccctcgaatacgctc
cctgcgccgcgcgtgacgaagcgaggcactgctgtcctcagttatgcagaagatgcctac
gatgacgatgatttcgaagatagtgaccgtccacggcgagcaacgggcctgcgcagtgta
caaaaggccgacccgtcaagcgtggaccaacaagcgcaaatagcagctctaggcgaagag
ctcactgcgcctatcgacacgcaggggatatggcgggactggatgggcagaccgaagcgt
aaccttacggaaaaacaagtccagacgcagtcggttctgccagtcacattgattccgatt
cgaatagacatggacatacagtctttccgtccagaagccccgctaccaacgccctccaat
gctcgggattttggcatcaacgagaacttgcccgcatacaagcagccggatgtcacgcca
gcttacagattgaaggattctttcctctggaacctccacgaggccttgaccacgcctgat
caatttgcgaaacaattcgtcgacgagctggatcttccgactgaacgcaaaccaatgatc
atttcacagattgcaaaccaaatccggcagcagctagaggagtatgctggagttgcgctg
caccccctcttccattctacagcatcgcctgctgtacaaggtgtccagagtatccaagca
acaggtgccaaagtcacactacccgaaagaagtcgagacggcacttctacacccgtcgtt
cccgccactaatggagtttccacccctgtgacaaacggcgcatcgcacacagagggtgcg
caaacacctgtaggcataccgaatggcatcagcgcggctgccaccgcactgccatccgag
gagctccacaatccagatgacacctaccggtgtattgtcactctcaacatcaaccttatg
aaccggttatacacggacaagttcgaatggtcactcctgcatccaccgggttttgcggaa
atgtttgccaaaactacctgcgcagatctcggactttcaggggaatgggttaacgccatg
acacatagcatttacgaagcagtattgcgactcaagaaggaggcttgtgaaaatggcggg
ttagtgggtgatggggagattgacaacgacgctgttgagcccacaatcggcgcgggctgg
agatacgaccaagagcacttgtgcgatgaatgggaaccgaaagttgagatcttatcaccc
gaggagattgagaagcgcgaaggtgaccgcgagaggcaaatccgcagattacggagagaa
acagcgcgcttctcctcgaccacaaatatgacgggcgccccagccaacgaattcttcaac
aacattgagggacaagaaaacatgggacgcggcgagcgcagcaagaagaagaggaggttt
aggagtttgagccctgtcggacggggcacgcctggagctggagggggctcaggctatggt
ggacaggatggtggtctacaagaaggagaacggcaaacgtggagatgcgcacactgttgg
gtgtggggaactgccgtgtgggctgtccgcgatggaccaaagggaccgcgtaccctatgc
aacaactgtggatacctctatgaacgcgacaagaaactcccgccttggtctgaaaacttg
ttttacagcgaacgaccgcttcatgaagttcagcagccatatcggtcacagcggtaa
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