Pyrenophora tritici-repentis: 6340705
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Entry
6340705 CDS
T10215
Symbol
PtrM4_060300
Name
(RefSeq) RpoC, DNA-directed RNA polymerase, beta' subunit- subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03020
RNA polymerase
Brite
Enzymes [BR:
ptrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
6340705 (PtrM4_060300)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
6340705 (PtrM4_060300)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
6340705
NCBI-ProteinID:
XP_001932816
UniProt:
B2VYJ3
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All DBs
Position
2:1469540..1474007
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AA seq
1471 aa
AA seq
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METPRTTAKQQVVDRIPARIKHIQFGIYSNQDIVNQAVLEVSDRNVYDLQPGANNTRTLT
SNGPMDIHMGISSKQGNCGTCGEGLDKCNGHFGHIKLALPAFHVGYLKHIIEVLNCICKD
CSRVLLDEVERRRYLRSMRRPDMDTLRKGAVTKKIIEDCRKKKTCPYCNALQGTVRKVPG
HPLKIIHNRYDAFNRSTAKTKKPPPGKLEFDQSFDTAKSANPDVDKHVKKAVDDMHPLRA
LNLFKKISPEDCELLAMVPEDARPEMLIWEYMPVPPVALRPSVMQEGGATEDDVTNKIGD
ICHISSIIRAGLARGFPLQILMEQWDFLQLQIAMYINSDAPGLKQQGLQKTMRGFSQRLK
GKGGRFRQNLSGKRVDFSGRTVIGPDPNLSIDEVAVPQRIAKNLTYPEKVTRYNIEKLRR
LVRNGAQKYPGANYILTGQGPNKDPIKISLIALSRNKGERLDFTAKRLKIGDIVERHIED
GDIVLFNRQPSLHKLSILSHRAKIRPWRTFRLNECVCNPYNADFDGDEMNLHVPQTEEAR
TEATELMGVKYNLATPKNGTPIIAAIQDFITAAYLLSNKNNFFDRKTFCQIVNYMFNGEG
AFDPDTGKKHPIDIPPPVIWKPQALWTGKQVFNLLMRPNKGCRVLINLEAACKQFKGTPG
QAPDLNENDAYLVIRNSEVMCGVMDKATVGDGKKDSVFYVMMRDFGPDHAVQGMNRLSKL
SARWLTNNGFSLGISDVTPGDKLNMKKQLLVQEAYAQCDKLISDFSNGKLQPDAGCDAEQ
TMENRIGGILSGVRQAAGEICFEELSRWNSPLLMAKCGSKGSNINVSQMVASVGQQMIGG
ARVADGFQHRTLPHFPKAARQPASKGFVSNSFFSGLTPSEFIFHAMSGREGLVDTAVKTA
ETGYMSRRLMKSLEDLSAHYDDTVRNSSGTVVQFQYGDDNLDPVDMEGKAKPVHFDRTFS
HAVTSTWDNAESSLTPQEVRDITESKLNTERNKYTRYKLDGVTQLDYRDPSDDGIDQHES
LRDFLDTVQDYIFKKAKKLEDTLTWLGVVQTSVEDGKQSPADAEKYSLADGIAKISRSAL
DTFIALCWSKYHRSRVQPGHAVGAIGAQSIGEPGTQMTLKTFHFAGVAGMSITQGVPRIK
EIINASSTISTPVIDCELENKVSERVAREVKARIEKTYLRDVIRYVEDVWYPEGAYVAMR
IDWDTIQKLFIDVKPHEIKAAISAHKPLKWGKAGAAVHVGQKYIRVEVPDPDATKKRPAK
TSRNHKSFFERVQQVKALIPDVVIKGYPDCTRAVIKKETSPNAQGQYECKLLVEGYGLRN
CMTTPGIVPYKTVSNNIMEVKTVLGIEAARATIVREIGSVMGNMDIDPRHMQLLADVMTF
KGEVFGITRFGLQKTRDSVLQLASFEKTPDHLFEAAARGKTDTIDGVSECIIMGQSVKLG
TGSMQVVRPLYLVEEDFKPKKSLFEEGWDAL
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggagactccgcgcaccactgcaaagcagcaggtcgtggaccgcatccccgcgcgcatc
aagcatattcaatttggcatctactccaaccaagatattgtgaaccaggccgtcctggaa
gtatccgatcgcaatgtctacgacttacagcccggcgcgaataatacccgcactctcacg
tccaacgggcccatggacattcacatgggcatatcgagcaagcaaggaaattgcggtacc
tgtggagaaggtcttgacaagtgcaacggccactttggtcacatcaagcttgcgctgccc
gcatttcacgttggctatctgaagcacattatcgaggtgctgaactgcatctgcaaggac
tgctcacgcgtgctgctggacgaggtggagcggcggagatatctgcgaagtatgcgccga
ccggacatggacacgctgcgcaagggtgccgtcaccaagaagatcatcgaggactgtcgc
aagaaaaagacatgcccgtactgcaacgccctccaaggcaccgtccgcaaagtgcctggt
caccctctcaagatcatccacaaccgatacgacgccttcaaccgatcgaccgcaaagacc
aagaagcctccgccgggcaagctcgagttcgaccagtccttcgataccgccaaatccgcc
aatccggatgtggacaagcacgtgaaaaaggccgtcgacgacatgcatccgctgagggcg
ctcaatctcttcaagaaaatatcgcccgaggactgcgaactgctcgccatggtaccagag
gacgcgcgaccggagatgctgatctgggaatacatgcccgtaccgcctgtggctctgcgg
ccgtcagtcatgcaagaaggaggtgcgacagaagacgacgtgaccaacaagattggagac
atctgccacatcagcagcatcatacgcgccggactcgcccgcggctttcctctccagatt
ctgatggagcagtgggactttctgcagttgcagattgccatgtacatcaacagtgatgcc
ccaggtctcaaacagcaaggactacaaaagaccatgcgtggattttcacagcgtctcaag
ggaaagggcggtcggtttcgacagaacctttccggaaagcgtgttgacttctctggccgt
actgtcatcggtccagatccaaatctgagtatcgacgaggtcgcggtaccgcaacggata
gccaagaaccttacgtatcctgaaaaggtcacacggtacaacatagagaagctgaggagg
cttgtgaggaacggtgcacaaaagtaccctggtgccaactacattctcaccggccaaggt
ccgaacaaggacccgatcaagatatcactcatcgctctttcgcgtaacaaaggcgaacgg
ctcgatttcactgcgaagcgactcaagattggtgacattgtcgaacgccacattgaggat
ggcgacattgtcctcttcaatcgacagccgtccctgcacaaactgagtattctaagtcat
cgagcaaagatacgcccatggcggacattccgactgaacgagtgtgtctgtaatccatac
aacgctgatttcgatggcgatgagatgaacctgcacgttccacaaaccgaagaggcgcga
accgaagctaccgaactcatgggtgtgaaatacaacctcgctacacccaagaacgggaca
cccatcattgccgccattcaagatttcatcactgccgcctatctactcagcaacaagaac
aatttcttcgaccgaaagaccttctgtcaaatcgtaaactacatgttcaacggagagggc
gcgtttgacccagatacaggcaagaagcaccccattgacataccgcctcctgtaatatgg
aagccccaggcactatggactggaaagcaggtcttcaacctcctgatgaggccgaacaag
gggtgtagggtattgatcaacctcgaggctgcgtgcaagcaattcaaaggtacccctggg
caggctcctgatctcaatgaaaacgatgcctatctagtcatccgcaactccgaagtcatg
tgtggcgtgatggacaaagctacagtcggtgacggcaaaaaggattccgtcttctacgtt
atgatgcgagatttcggtcccgatcacgctgtccagggaatgaacaggctgtccaaactg
tccgcgcgatggctcaccaacaatggcttctcccttggcatcagcgatgtcacacccgga
gacaagctgaacatgaagaagcaattgctcgtgcaagaagcgtacgcccagtgcgataag
ctgattagtgatttcagtaacggcaaattacaaccagatgccggttgcgacgcagaacag
acaatggagaacagaatcggtggtatcttgtctggtgttcgtcaagcggctggtgaaatc
tgttttgaggagctcagcagatggaactctcccttgctcatggccaagtgtggttcaaag
ggttcgaacatcaatgtctcccagatggttgcttccgtcggccaacaaatgattggcggt
gcccgtgtcgcagatggattccaacaccggaccctgcctcactttcccaaggccgcccgc
cagcctgcatccaaaggattcgtcagtaatagtttcttttctggtctgacaccatccgag
ttcattttccacgccatgagtggtcgtgaaggtttggtcgatacagctgtcaagaccgcc
gagactggctacatgagtagaaggttgatgaaatcgctggaagatctctccgcgcactac
gacgacaccgttcgaaactcatccggtactgtggtgcagttccagtacggagacgataat
cttgaccccgtggacatggagggcaaagcaaagcctgtgcactttgacaggacattttcg
catgccgtcacatcgacctgggacaatgccgagtccagtctgacaccgcaagaggtacgc
gacatcactgagtccaagttgaacaccgagcgaaacaagtatacgcgttataagctggac
ggtgtgacacagctagactatcgtgacccgagcgacgatggcattgaccagcatgagtcc
ctgcgtgatttcctcgatacagtgcaagactacattttcaaaaaagccaagaagctcgag
gatacgcttacctggctcggagtggtccagaccagtgttgaagacggcaagcagtcacca
gcggatgcggaaaagtacagccttgccgacggtatcgcaaagatctcgcgtagtgcgctt
gatactttcattgcgctctgctggtccaagtaccaccgttctcgtgtacaacccggccat
gccgtcggagctatcggtgcccaatctatcggcgagcctggaacgcaaatgacacttaaa
actttccattttgctggtgtcgctggtatgtccattacccagggtgtgcctcgtatcaag
gaaatcatcaacgcctcctccaccatctccacgcctgttatcgattgcgagcttgagaac
aaggtctctgagcgggtcgcacgagaggtcaaagcgcgtatcgagaagacatatctccgt
gacgtgattagatacgtcgaagatgtatggtaccctgaaggcgcatacgtcgccatgcgc
attgactgggataccatccaaaagctctttattgacgtaaagcctcacgaaatcaaggca
gcaatcagcgcacacaagccgctcaaatggggcaaagccggtgctgcagttcacgtcggc
cagaaatacatccgcgtcgaagtacccgaccctgacgccaccaaaaagcgccctgcaaag
acgtcacgcaaccataagagttttttcgagcgcgtccagcaagtcaaagccctcattccc
gacgtcgtcatcaaaggctaccccgactgcacccgcgctgttatcaagaaggaaacctcg
cccaacgcacaaggccaatacgaatgcaagctcctcgtagaaggctatggcctccgtaac
tgtatgacgacgccgggcatagtgccctacaagaccgtctccaacaacatcatggaagtc
aaaaccgtcctcggcattgaagccgcccgcgctaccattgtgcgtgaaatcggatcagtc
atgggtaacatggacattgatccgcgtcacatgcagcttcttgccgacgtcatgacgttc
aagggtgaagtttttggtatcacgcgctttggactgcagaagacaagggactcggtgctg
caattggccagtttcgagaagacgcctgaccatctgtttgaggctgctgcgaggggaaag
acagataccatcgatggtgtcagtgaatgcatcattatgggacagagtgttaagcttggt
acaggtagtatgcaggttgtgaggcctctgtatcttgtcgaggaggatttcaaacctaag
aagtcattgtttgaggagggatgggatgcgctatag
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integrated database retrieval system
