Pyrenophora tritici-repentis: 6340764
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Entry
6340764 CDS
T10215
Symbol
PtrM4_060860
Name
(RefSeq) Tex, Transcriptional accessory protein
KO
K11292
transcription elongation factor SPT6
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrr03021
]
6340764 (PtrM4_060860)
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6340764 (PtrM4_060860)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
6340764 (PtrM4_060860)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
6340764 (PtrM4_060860)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HTH_44
HHH_7
Spt6_S1
SPT6_acidic
Tex_central_region
HHH_9
SH2
Tex_YqgF
NBD94
Motif
Other DBs
NCBI-GeneID:
6340764
NCBI-ProteinID:
XP_001932875
UniProt:
A0A2W1GYY8
B2VYQ2
LinkDB
All DBs
Position
2:complement(1627209..1631599)
Genome browser
AA seq
1416 aa
AA seq
DB search
MAQYFDTIADVGSDEEEDEDFDGEAGEAGEPRPKKTNGTNGIDDSSEEEDDDDEDRLRQA
SYSEGEGFVVDEEEDEEDEVAERRRRRKKKRKNRDEEEALDDEDLDLIGVEVERPAEEQG
KTRFKRLKRGHKERVKSRGVDDIFSDEDVNEDYDEPRRIGGDEFDDFIEDDKFEDEIEDD
RDVTQPGINLITKGLQAAGLDEGAEEDYRAAFGDGTDYDWALEMQEAEEEEQAGEGRELQ
LKDVFEPSQLQERMLTDEDNVIRETDIPERLQLARKPFKEIELTPEDMQARLTEEATWIS
NMLWPKKGLPRYFSQPFEKAVRKVLEFINIEDYEVPFIFNHRKDYLIHAPSDHDDYDDID
NPPPMDARPERLLNQADLWEVFDLDLKFRAFAEKRDALRQNYENLKAVYSEITDTEIEEL
SNRAATIEEIQELQDYLHYKYSQELNEVRQELNGTQKRANNARNFFDKLRSGKALQLVKA
IGITPDDFAKKVDGTNTGAHTIEDPPYKVEELADQLAEAPETGATLLRSTRLLFVQDLQM
CSRLRRYLRASFYQNAEIDCLRTDKGMRTITEDNPYYEFKYLRRVTFGDLQGRPDLFLKM
LKAESEGLMQVRITMGNYPNFKSRLHKEIVSEGVSDVSDTWNALRKELLDTALDKLQGVI
ANGVKETLRARCEDELAASARENYYNKLDQAPYKLKTAPLGSVPNVLCLSNGSGMRGDAI
MWAYVENDGRVLEHGRLIDMRLGNPERNIPEGQDVEKLVDVIQRRRPDVIGVSGFSVETR
KLYKDIQEIINQRGLTGPAYEDEDTGEERNEPLEIILVNDEVARLYHTSARAIAEFPKHP
ALTRYCIALGRYLQNPLAEYASLGKDIVSIPFIPNQTLIPQDKLLDRLETAMVDMVNLVG
IDLPETYDDKYLSKLIPYVCGLGPRKADRLIKAIQANSDEILSRFDLLGVSESRDLKAAM
GPKVFQNCASFLYIPYDATEESSDYLDYTRVHPEDYDLARKMVADALNMDEEDVKAETDE
GGPSAVVRKMVREETTDLVNDLALEDYAAEIERNFGQRKRATLETIRAELDNPYEEIRQM
FAMLSGDELFTMLTGETKDSLYEGMVVPVTIRRTFPDHIEVKLECGIEAGVSESEFPEGV
GGGGQEPRHVFSTHQIVRARILYLNRKALTAQLSLRGDLIRQPEKKRFERAAGEWDEAQE
AQDKKAAEKEKEVATGRPNRVVNHPLFFAFNTVQAEEYLGGKETGDLVIRPSSKGFDHLV
VTWKVSNNAYQHLDVLEMNKPNQFSLGKQLKIGKHTYSDLDELIVNHVEAMARKVTEITR
DDRFQPGTREDAEKWLGNYCQANPLRSMYAFCSMPKYPGHFWICFQMSAKGPKGAWPIKV
VPNAFELQKHVYPDMVALKNGFKMLVTAAKQAAPRR
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatactttgacacaatcgccgatgtgggcagcgatgaggaggaggatgaggac
ttcgatggcgaggctggtgaggctggcgagcccaggcctaaaaagacaaatggcaccaac
ggcatcgacgactccagcgaggaggaagacgatgatgatgaggaccgactccgacaggca
agttatagtgaaggtgaaggcttcgtcgttgacgaggaggaggacgaagaagacgaagtc
gcagaacggcggcgacggcgcaagaagaagagaaagaaccgcgatgaggaagaagccctc
gacgacgaagatcttgatctgatcggcgttgaagtggagcgtccagcggaagaacagggg
aagacgagattcaagcgcctcaagcgtggccacaaagagcgcgtcaagtcccgcggtgtc
gacgacattttctccgacgaagacgtaaacgaggactacgacgaaccgcggcgtattggc
ggcgatgaattcgacgattttattgaggacgacaaatttgaagatgagatcgaagacgac
cgcgacgttacgcagccgggcataaacctgataaccaaaggactacaggctgctgggctg
gatgagggagccgaagaagactacagagccgcgttcggtgatggcacagactatgattgg
gcgttggagatgcaagaggcggaagaggaagagcaagctggcgaaggccgtgagctccaa
ctcaaggatgtcttcgagccatcgcagctacaagagcgtatgcttacggatgaggacaac
gtcattcgcgagaccgatatcccggagcgcctgcagctagcccgaaagcccttcaaggaa
atcgaactcacaccagaggacatgcaggcacgtctgaccgaggaagccacctggatcagc
aacatgctgtggccgaagaaaggtctcccgagatatttttcacagcccttcgaaaaagcc
gtgcgtaaagttctcgagttcatcaacatcgaggactacgaagttcccttcatcttcaac
caccgaaaagactatctcattcatgcacccagcgatcacgatgactatgacgacatagac
aacccacctcccatggacgcgcgaccagagcgtctgctcaaccaggctgacctctgggag
gtctttgacttggacctcaagttcagggcttttgctgagaagcgtgacgccctaaggcaa
aactatgagaacctgaaggccgtttactctgagattacagataccgaaatcgaggagttg
tcaaaccgcgccgccacaatcgaagagatccaagaacttcaggactatctgcactacaag
tattcgcaggagttgaacgaggtccgccaggaattgaatggaacgcagaagcgtgccaac
aacgcacgcaacttcttcgacaagctgcggagcgggaaggcactccaactcgtcaaggcg
attggcatcacaccagatgactttgcgaagaaggttgacggaacaaacactggcgcgcac
acgattgaagatcccccttacaaggtcgaggaactcgctgatcagctggccgaagcccca
gagacgggcgccactctgctcagatccaccaggttactgttcgtgcaagatttgcaaatg
tgctcacggctgcgcagatacttgcgcgctagcttctaccaaaacgctgagattgactgt
cttcgtactgacaagggcatgcgcacaattactgaagacaacccgtactatgagtttaag
tacctgcgtcgagtcacctttggcgatctccagggccgcccagacctcttcctcaagatg
ttgaaggctgaatctgaaggtctcatgcaagttagaatcaccatgggcaactacccgaac
ttcaagtcgcgtcttcacaaagagattgtctctgagggtgtcagcgacgtttccgatact
tggaacgctctccgcaaagaattgcttgatacggctctagataagctacaaggtgttatt
gcgaacggcgtcaaggaaacgctgcgtgctcgatgcgaggatgaacttgccgcctcggca
agagaaaactactacaacaagctcgaccaggcaccctacaagttgaagactgcacctctc
ggatctgttcctaatgttctctgcctatcgaacggcagcggcatgcgcggcgacgccatc
atgtgggcttatgtcgaaaacgatggtcgcgtcttagagcatggccgtttgatcgatatg
cgtcttggcaacccggagcgtaacattcctgaaggccaagacgtcgagaaactggttgat
gtcatccagcgtcgccgtccagacgtcatcggtgtcagtggcttctcagtcgagactcgc
aaattgtacaaggacatccaggaaatcatcaaccagcgtggcttgacaggtccggcatac
gaggacgaggatactggtgaagagaggaatgaacctcttgagatcatcctggtcaacgat
gaggttgcccgcttataccacaccagtgctcgagcgatcgcagagttccccaaacatcca
gcgctgacgaggtactgtatcgcccttggaaggtacctgcaaaatcctctcgcagaatac
gcatctctcggcaaagacattgtttccatccctttcatacccaaccagactttaataccc
caagacaaacttctagaccgcctggaaacagccatggtggacatggtcaacctcgtcgga
atcgacctaccggagacatatgacgacaagtacctgtccaagttaataccctacgtgtgc
ggtctgggaccgcgcaaagccgacaggctgatcaaggcaatccaagctaatagcgatgag
atcctttcgcggttcgacctccttggtgtatctgagtcccgagatctcaaggcggccatg
ggacccaaggtcttccagaactgtgcaagtttcttgtacatcccttacgacgcgaccgaa
gaatcatcggactacctggattacacccgagtacatcccgaagattacgatcttgcacga
aagatggttgctgatgctttgaacatggacgaggaagatgtaaaggcagagaccgacgag
ggcggtcccagcgccgttgttaggaaaatggtgcgggaagagaccaccgatctagtcaat
gatcttgctcttgaagactacgctgcggagattgagaggaattttggacagcgcaagcgt
gcgacactcgaaaccattcgggctgagctggacaacccctacgaagagatccgacagatg
ttcgcgatgctgtctggtgatgagttgttcacgatgttgactggtgagaccaaggactcc
ttgtacgagggtatggtcgtccctgttaccatcaggcgcactttcccagatcacattgaa
gtgaagctggagtgtggcattgaagctggcgtctctgagtcagagttcccagagggtgtt
ggtggtggtgggcaagagcctcgccacgttttctccacccaccagattgtacgcgcacgc
attttgtacctgaaccggaaagcacttactgcacaactatcgctcaggggcgaccttatc
cgacaaccggaaaagaagcgtttcgagcgagcagccggagaatgggatgaggcacaagaa
gctcaggacaagaaggcagccgagaaggagaaggaggttgcaactggccgacccaatcgt
gtcgtcaaccacccgctcttctttgcgttcaacacggtgcaagctgaagagtaccttggt
ggcaaagagactggtgaccttgtcattcgtccttcgtccaagggtttcgatcatttggtc
gttacatggaaggtctccaacaacgcctaccaacatctcgatgtcttggagatgaacaag
ccaaaccagttttccctcggcaagcagctcaagattggaaagcacacatactccgatctc
gacgagttgatcgtcaaccatgtggaagccatggcgcgcaaggtcaccgaaatcacacga
gacgatcgattccaacccggtactcgggaagacgccgaaaaatggctaggaaactactgt
caagccaacccgttacgctccatgtacgctttctgcagcatgcccaaataccccggtcac
ttctggatctgcttccaaatgagcgcaaagggaccaaagggcgcgtggcccatcaaggtg
gtgcccaacgcgttcgagctacagaaacatgtctaccctgatatggtcgcgctaaagaac
ggtttcaagatgttggtcacggcggcgaagcaggcggctcccaggcggtag
DBGET
integrated database retrieval system
