Pyrenophora tritici-repentis: 6340840
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Entry
6340840 CDS
T10215
Symbol
PtrM4_061810
Name
(RefSeq) RhgB-N domain containing protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
6340840 (PtrM4_061810)
Enzymes [BR:
ptrr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
6340840 (PtrM4_061810)
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Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
6340840
NCBI-ProteinID:
XP_001932951
UniProt:
A0A2W1G7F1
B2VYX8
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Position
2:complement(1880953..1882701)
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AA seq
547 aa
AA seq
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MRFLATFTAFLLAPAAVFAAWGYTDDGKNYVIDTGANLVVKVSKTNADMTSIKYRGVEYN
GQNGKNSHVESGLAPGTVTIKQYTSPANIIKVTMKVGTLVHTLIFRYGNPNVYIFMNKKD
SSITVSRYILRIPGGIFKNNVNEDTDWVPDGAAAIESGDINGLNGQTWSKHYSGKKYGRT
IDYDYVGYTNANVGMYLIRSDHEKASGGPFFRSLIRRGGSGGPDLYDIYHYNMGHTDIMR
LGLQGPSVLHFTDNGAAPNNNLFARKADWGWLDSLEIDGWVPASRRGAVAGVGLANMKSG
FQYVVGLKSAQAQYWTIATGAWRIDKVLPGDYTLTVYKGELEVHTSTVTITAGGTATRNT
ITCSDPADTAVIWRIGDWDGTPKGFLNFGDTPMKPTYMHPSDSRLAKWDAGNYIIGTSTA
SGFPGYMWKDINNDHLVYFRLTDAQLAKGAKIRIGVTEGMAGGRPSISVGSWSAPLQGDK
GQGDTRSLTVGTYRGNNYIYEYNIPASAWVQSTREYQILKISVISGKTSTGYLSPGVSFD
AIDMLGA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttctcgcgactttcacggcttttctcctagccccggctgccgtcttcgcagct
tggggctacactgacgacggcaagaattatgtcatcgatacaggcgcaaatcttgttgtc
aaggtcagcaagaccaacgcggatatgacatccatcaagtaccgcggcgtagagtacaac
ggtcagaatggcaagaactcgcacgtcgaatctggacttgcaccaggcactgttaccatc
aagcagtacacttctccggccaacatcatcaaagtcaccatgaaggtgggaacactcgta
catacgcttatcttccgctatggcaacccgaacgtgtacatcttcatgaacaagaaggac
tccagcatcactgtgtctcgatacattcttcgtatacctggcggcatcttcaaaaacaac
gtcaacgaagacaccgactgggtccctgatggcgcagcggctattgaatcaggtgatatc
aatggtctcaatgggcaaacttggtccaagcactactctggcaagaagtacggtcggacc
atcgactacgactatgtcggctacaccaacgcgaatgttggcatgtatctaatccggtcc
gaccatgagaaggcttcaggcggaccttttttcaggagcttgatcagacgtggtggaagt
ggcggcccagatctatacgatatctaccattacaacatgggtcacactgatattatgcga
ctcggacttcaaggcccctctgtgcttcatttcaccgacaacggcgctgcgcccaacaac
aaccttttcgcacggaaggctgactgggggtggctcgactctctcgaaattgatggttgg
gtaccagctagccgccgtggtgctgtagcgggtgtcggccttgctaacatgaagagcgga
ttccagtatgtcgttggtttgaagagtgcccaggcgcagtactggaccatagcgactggt
gcctggagaatcgacaaagttctaccaggagactacaccttgactgtgtacaaaggcgaa
cttgaagttcatactagcacagttactatcactgcgggcggaacagcgacgcgaaacacc
attacatgcagcgatcccgccgacaccgctgtcatctggcgtattggtgactgggatgga
acccccaagggctttttgaacttcggagacacgcctatgaagccgacttacatgcatcca
tccgactcacgccttgctaaatgggacgctggaaactatatcatcggcacaagcactgca
tctggattccccggctatatgtggaaggacatcaataacgaccaccttgtctacttccgt
ctcaccgatgcacagctagccaagggtgctaagatcaggatcggcgtcactgagggaatg
gccggaggacgaccaagtatctctgtaggcagctggagcgctcctttgcagggcgacaag
ggccagggcgataccaggagtttgaccgtgggaacttaccgaggcaacaactacatctac
gagtacaatatcccagcaagtgcttgggtgcagagcacgagagagtatcagatactgaag
atttcggtcatttctgggaagacttcaacaggttatcttagtcccggagtgagcttcgat
gcgattgacatgcttggggcttga
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