Pyrenophora tritici-repentis: 6340896
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Entry
6340896 CDS
T10215
Symbol
PtrM4_062410
Name
(RefSeq) putative c2h2 finger domain protein
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6340896 (PtrM4_062410)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
6340896 (PtrM4_062410)
Spliceosome [BR:
ptrr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
6340896 (PtrM4_062410)
Complex C
U4/U6.U5 tri-SnRNP related factors
6340896 (PtrM4_062410)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
C2H2-zf_KIN17
BRCT_assoc
zf-C2H2_fungi_2
zf-C2H2_14
Fzo_mitofusin
Motif
Other DBs
NCBI-GeneID:
6340896
NCBI-ProteinID:
XP_001933006
UniProt:
B2VZ33
LinkDB
All DBs
Position
2:2054181..2054825
Genome browser
AA seq
214 aa
AA seq
DB search
MSGKAGAYGTSGGGDTDFRKTWDRDEMAKKAKDREAKERDEGKERYEAKLAGKTYRRRAS
TPDDLKQTEARSERIDWSKMIGKQTLTSAAAAVGKRGRGAGAYCQACDLTFKDNIQYVEH
LNSKQHLVATGQSGEVHRATLQEVRERLRYLKRKRDEDKFLEVTDLDARLAMTKEQLEKD
AEEKRRLRNEKRRAKKKTDANAMEWKVEGDGIIR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaaagcaggcgcatatggcacgtcgggcggcggcgacactgacttcaggaaa
acatgggatcgcgacgagatggcgaaaaaggccaaggacagggaggcaaaggagcgcgac
gagggcaaagagcgatatgaggcaaagctggctggcaagacgtacaggcgaagggcttcg
acacccgacgatctgaagcagacggaggcaaggtcagagcgcatagactggagcaagatg
attggaaagcaaaccctcacatcagcagcagcagctgtaggcaagaggggccgcggtgca
ggtgcatactgtcaagcctgcgacctcacattcaaggacaacatccagtacgtcgagcat
ttgaacagcaaacagcatttggtcgcgaccggtcaatcaggcgaagttcatcgcgccaca
ctccaggaagtgcgagagcgcctgcgctatctcaagcgcaagcgagatgaagacaagttc
ctcgaggtcacagatctcgacgcaagactggcaatgaccaaggagcaattagagaaggac
gcagaggagaagaggcggctgcgtaacgaaaagcgcagggcgaagaagaagacggatgcc
aacgccatggagtggaaggttgagggggatggcataatccgctga
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