Pyrenophora tritici-repentis: 6340938
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Entry
6340938 CDS
T10215
Symbol
PtrM4_062860
Name
(RefSeq) WD40 repeat protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptrr03009
]
6340938 (PtrM4_062860)
Ribosome biogenesis [BR:
ptrr03009
]
Eukaryotic type
90S particles
Other 90S particles
6340938 (PtrM4_062860)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT80_2nd
Nha1_C
Beta-prop_HPS5
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_SCAP
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
6340938
NCBI-ProteinID:
XP_001933048
UniProt:
B2VZ75
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All DBs
Position
2:complement(2173707..2175470)
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AA seq
587 aa
AA seq
DB search
MSSSFFTTPASQRKRKRTNTTSSAPKRRNTDNEARRADRDDSISGSDDSDDNGGPVLDES
DDDDTSEDENETAAEKRRRLAERYLDNIRNEVEQEVGFDAEQIDKDLIAERLKEDVAEGK
GKIYRSIADELDFEQAEHVTGYSGLQKATTGCAVKLPYAWTISKDLVVEKWEIADPKSYA
PDPARPSNVTPRRTPKRLFWRKGNKNKKGDRSYLGHTGEIVSIAVSDSGKYLATGDKHAR
LIIWDADTLKPRHLFTRHRDAVLSLSFRRGTEQLFSGGADRAVIVWSAPESAYIETLVGH
QDAVVGVAGGLETNQETCVSVGARDRTARLWRVVEENQLVFQGGVTTRQKGLDKLRKGRF
ANGLAKLEERGEQQDNEEDAPIVYAQGSIDCVGLLDAGLFVTASDNGALSLWSVNRKKPL
FTYPLTHGRDPPLSPEQMSANHDAAISVKPGPRLPRYVTALATVPFADLILTASWDGWIR
AWKITADRKSIEPVGKIGCVPLDEDESEAEDAILIRGIVNGLAIQERGDRGKDGLCVVAA
VGKEPRLARWMSGKVKNGICVFEVPRKHLTSNGTEDDEEAESGAEEA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtccttcttcaccacgcctgcttcgcagaggaagagaaagcgaaccaatacc
acatcgagcgctccaaagaggcgcaacaccgacaatgaagcccgccgcgccgaccgcgac
gactccatcagtgggagcgacgattctgatgacaatggcgggcccgttctagacgaatct
gacgacgacgacacatccgaggacgaaaacgagacagcggccgagaagcgtcgcagatta
gcagagcgctaccttgacaacattcgcaatgaggttgagcaggaggtgggcttcgacgct
gagcagattgacaaggacttgatagccgagcgtctcaaggaagacgtcgcagagggcaag
ggaaaaatttaccgctcaattgccgacgagctggactttgagcaggccgagcatgtcaca
ggttactctggtctacaaaaggctacaacaggctgtgctgtgaagctgccatatgcctgg
acaataagcaaggacctggtggtggagaagtgggaaattgctgatccaaaatcatacgcc
ccagacccagcccgtccgtccaatgtcacgccgcgcaggacacccaagcgactgttctgg
cgcaagggaaacaagaataagaagggtgacaggtcctatcttggccacactggggagatt
gtctctattgctgtttctgactctgggaaatatctcgcaactggcgacaagcatgctcgt
ttgatcatctgggatgcagatactctcaagccgcgccacctatttactcgccatcgcgac
gccgttctctctctatctttccgaaggggcaccgagcagttgttctcaggcggcgcagat
cgcgcagttattgtgtggagtgcgccagagtcggcatatattgagacgctagtaggacat
caagatgcagttgttggtgttgccggtgggctcgagaccaaccaggaaacatgcgtcagt
gtaggcgctcgagatcgtacagcccgtctgtggagagtggtggaggaaaaccagcttgtc
ttccagggtggagtgacgacaagacaaaagggcctggacaagttgcgcaaaggccgcttt
gccaatggccttgccaaacttgaagagaggggtgaacaacaggacaacgaagaagacgcc
cctattgtatacgctcaaggctcaattgattgcgttggcctactggacgccggccttttc
gtcacagcatcggacaatggtgcgctttcattgtggtctgtcaacagaaagaagcctctc
ttcacatacccacttactcacggccgggatccgcccctatctccagaacaaatgtccgcc
aaccatgatgctgcaatctcagtaaaacccggcccgcgactaccacgatacgtcacagct
ctcgctaccgtaccctttgccgacctcatcctcacagcaagctgggacggctggatacgt
gcatggaaaatcacagcggacaggaagagcatcgagcccgttggcaagattggctgtgta
cctcttgacgaagacgaatcagaagccgaagatgcaatcctcatccgaggtatcgtcaac
ggcctcgccatccaagagagaggagatcgaggcaaggatggcttgtgtgttgtagctgct
gtaggaaaggaaccaagattagccaggtggatgtcaggaaaagttaagaacggaatctgc
gtctttgaagtacctaggaaacatctcacctccaacggtacagaggatgacgaggaggcg
gaaagtggtgctgaggaagcctag
DBGET
integrated database retrieval system