Pyrenophora tritici-repentis: 6341086
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Entry
6341086 CDS
T10215
Symbol
PtrM4_064550
Name
(RefSeq) RNA14, Pre 3'-end processing (cleavage and polyadenylation) factor
KO
K13217
pre-mRNA-processing factor 39
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
6341086 (PtrM4_064550)
Spliceosome [BR:
ptrr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
6341086 (PtrM4_064550)
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GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_12
Motif
Other DBs
NCBI-GeneID:
6341086
NCBI-ProteinID:
XP_001933196
UniProt:
A0A317AK60
B2VZM3
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Position
2:2617347..2619678
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AA seq
556 aa
AA seq
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MLHTGRGAIAQIHYTGEEAAGEINKLLGAVIENEDDFERWEALVTRASDLEGGVTRNSSP
GAIELVRNVYDCFLTKFPLFFGYWKKYADLEFSIGGTETAEMVYERGVSCVTTSVDLWAN
YCTFKMDTSHDNDIIRELFERGAHFVGLDYQSHPFWDKYIEFEDRIQEPANVTKLYCRIM
HMPIYQSSRYYEKYCLLLADRPVEELVDSDMLETFKSAVQLENQGQPEKPALEIERQLRV
KIHEYWYEVYGKTSADTTNRWTFETAIKRAYFHVTDLEDAELENWRKYLEYEEKQGGFER
ISFLYERCLVACALYDEFWLRYARWMFSQGKEENTRIIYMRASCIFVPISAPTIRLNWAR
FEEKIGRITVARDIYLAMLEEAPEHTETLIALAGLERRHEGNDAAIHLLEEYIKRSNNQI
GGILAAEQARILWQCKGSVDEARQVFQNKYEQFPDSREFWVKYLEFEVAQSSPNQDEAHA
RIKAVHELMRTTGRFSSDVSKGLSHYYMSYLLDRGGKDAAEEYMQLDKDVNGAKQIEDGT
VAPPIAPAKPSHRTRF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgttgcacacggggcgcggtgccattgcccagatccactacacgggcgaagaggctgcg
ggtgagatcaacaagctcttaggtgcagttatcgagaacgaggacgactttgagcgatgg
gaagcccttgttacgcgcgcctccgatcttgagggcggcgtcactcggaactccagccct
ggtgccattgaacttgtgcgcaatgtctacgactgcttcctcacaaagttcccactgttc
tttggctactggaagaaatatgccgacctcgagttctctattggcggtaccgagactgcc
gagatggtgtacgagcgcggtgtctcttgcgtcacaacctcagtggacttgtgggcaaac
tattgcaccttcaagatggacacgtcgcatgataacgatattattcgagaattgtttgag
cgtggtgcccactttgtcggtcttgactaccagagccacccgttctgggacaagtacatt
gaatttgaggatcgcatccaagagccagcgaacgtcaccaagctctactgccgaattatg
catatgcccatctaccagtcttctcgatactatgagaagtattgcctactacttgccgac
cggccagtcgaagaactagtcgattctgatatgcttgagacgtttaagagcgcagttcag
ctggagaaccaaggacaacctgagaagccggcgctagaaatcgaacgacagttgcgcgtc
aagatccatgaatactggtatgaagtctacggaaagacctcggcggatacgacgaatcgc
tggactttcgaaacagccatcaagagggcctacttccacgtcaccgatctcgaagatgcc
gaactcgagaactggcgcaagtacttggagtacgaggagaagcagggtggcttcgagcgc
atctctttcttgtacgagcgctgtttggttgcgtgtgcgctgtacgatgagttctggctg
cgatatgcccgctggatgttctcgcagggcaaggaagaaaacacgaggatcatctacatg
agggctagctgcatattcgtacctatttcagcgcctaccatacgcctaaactgggcccgt
ttcgaagagaagatcggtcgtatcactgtcgctcgcgatatctacctggccatgctcgaa
gaggctcccgaacataccgagactctcattgctttggcaggcttggagcgacgccacgag
ggcaatgacgctgctattcacctgctggaggagtacatcaaacgttccaacaaccagatc
ggtggtatcctagctgcagaacaggcgcggatactctggcaatgcaagggcagtgtcgat
gaagcgcgtcaagtgttccagaacaagtacgagcagttcccggactcacgagagttttgg
gtcaagtacctcgagttcgaagtggcacaatcttcacccaaccaggacgaggctcatgcc
cggataaaggcagttcacgagcttatgcgcaccacaggccgcttctcttctgacgtctcg
aaaggactatcgcactactacatgtcatacctactcgaccgtggaggcaaggatgcagct
gaggagtacatgcagttagataaggatgttaatggtgcgaaacagatcgaagacggtact
gttgctccaccaattgcacccgcaaagcccagccaccgcactcgcttttag
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