Pyrenophora tritici-repentis: 6341160
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Entry
6341160 CDS
T10215
Symbol
PtrM4_065270
Name
(RefSeq) FimP domain containing protein
KO
K13174
THO complex subunit 5
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03013
Nucleocytoplasmic transport
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6341160 (PtrM4_065270)
09122 Translation
03013 Nucleocytoplasmic transport
6341160 (PtrM4_065270)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6341160 (PtrM4_065270)
03041 Spliceosome [BR:
ptrr03041
]
6341160 (PtrM4_065270)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
6341160 (PtrM4_065270)
Spliceosome [BR:
ptrr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
6341160 (PtrM4_065270)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
zf_topless
Motif
Other DBs
NCBI-GeneID:
6341160
NCBI-ProteinID:
XP_065964315
LinkDB
All DBs
Position
2:<2821284..>2822051
Genome browser
AA seq
215 aa
AA seq
DB search
MSEQQLPLASAEDALPTDLSTFNVADLIKTPHNARLHKEVQNLKKLINELVDYQVAHPKN
PKPVSREDIDREKEATREIERREKYIRAQLSVIKTLYRQSILKVREEKAKTSDDRAVNDA
LILGLHNLKYEEQSLRSEISAAENYDHKYMKLPLISVEEFLEQFPEHKESNEHELMTARI
EHEHQKGKDDLTKLDTMVEKFIEAAEPIKKVLAAE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaacagcttcctctggcgtcggccgaagatgcattgcctacggatctgtcc
actttcaacgtcgccgatctcatcaagacgccgcacaatgcgcgactgcacaaggaagtg
caaaacctcaagaagctcatcaacgagctcgtagactaccaggttgcgcatccaaagaat
cctaagccagtgtcgcgtgaagatattgacagggagaaggaggcgacgcgagaaatcgag
aggagggagaagtacattcgcgcccagctatccgtcatcaagactctgtacaggcagagc
atcttgaaagtccgcgaggaaaaggccaagacttcggatgacagggctgtcaacgatgcg
ctcatcctgggccttcataacctcaagtacgaagagcagtcgttgcgatctgagatctcc
gctgcagaaaactatgatcacaagtacatgaagcttcccctcatctccgtcgaagagttc
ctcgagcagttccccgaacacaaggagtccaacgagcacgaacttatgacggcgcgcatc
gaacacgaacatcaaaagggcaaggacgatcttaccaagctggacacaatggtagaaaag
ttcatcgaggctgcagaaccaatcaagaaagttctggctgcagagtaa
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integrated database retrieval system