Pyrenophora tritici-repentis: 6341300
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Entry
6341300 CDS
T10215
Symbol
PtrM4_066670
Name
(RefSeq) WD40 repeat protein
KO
K17302
coatomer subunit beta'
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptrr04131
]
6341300 (PtrM4_066670)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptrr04147
]
6341300 (PtrM4_066670)
Membrane trafficking [BR:
ptrr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
6341300 (PtrM4_066670)
Exosome [BR:
ptrr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
6341300 (PtrM4_066670)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
EIF3I
Beta-prop_SCAP
Beta-prop_DCAF4
HEAT_GCN1
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
6341300
NCBI-ProteinID:
XP_001933409
UniProt:
A0A834S3Q7
B2W086
LinkDB
All DBs
Position
2:complement(3196048..3198378)
Genome browser
AA seq
744 aa
AA seq
DB search
MTIKLWDWDKSWKCVQEFAGHQHYVMGIAINPKDPNTFASACLDRTVKIWSLGSSTPNYT
LEAHEAKGVNFIDYYPQSDKPYLLTTSDDRTVKVWDYTTKALIATLEGHTSNVSFAVYHP
ELPVIISGSEDGTIKIWHSSTYRLEQSLNYGLERAWCVAYQKGKNGVALGFDDGAVVITM
GREEPAVSMDGSGKLLWAKNNDILTSVIKGSDQLKDGERLTLPSKDLGSTELYPQSLLHS
PNGRFVAVCGDGEYIIYTALALRNQAFGSAMDFCWASKEHDKDYAIRESSTSVKIFRNFK
ERSVLNVGFSADGLSGGVLLGVKGQGGIGLFDWDSGALVRRIEVEPKSVYWSESGELVTL
ATEDTFYVLRYSRENYLEAVQNGEVDEDGAESAFEVVCDINESVRTGTWVGDCFIYTNST
NRLNYLVGDQTYTISHFDSPHYVLGYLPRDSRIYIADKDVNVVSFALSLAVVEYQTLILR
GDLEAAEETLPSVPKDQNNKIARFLEGQGYKEMALKVATDPEHRFDLALSLGDLQQAVSI
TREQDTEHKWKTVGDAALTNWDVKLAQECFVKAKDLGSLLLLYSATSDTAGLRELADLAE
TSAANNVAFSALWQIGDVQACIDLLVKTNRLAEAVLFSQTYKPSATAGLVKQWKEALEKE
SKTKVARLLGTPPHGEDEGDAEMFPEWDEYLRLEKEGGTVEDLLVQEDDEAEAEDADEEI
AADEEEEDEDEEDEDEEEESEEEK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgacaattaagctgtgggattgggacaagtcatggaagtgcgtacaagagttcgcaggt
catcaacactatgtcatgggcattgcgataaacccaaaagacccaaacacattcgcatcc
gcctgtctcgataggaccgtaaagatctggtcgctcggcagctcaacgcccaactacacc
ctcgaggcgcacgaggccaagggtgtcaactttatcgattactacccccagtcggacaag
ccgtacctcctcaccacgtccgacgatcgcacagtcaaggtctgggactacactacaaaa
gcgctgattgcaacacttgaaggccacacttctaacgtcagtttcgccgtataccaccct
gagcttcccgtcatcatttctggatcagaagatggcaccatcaagatctggcactcgtcg
acgtaccggttagagcagtcgttgaactacggcttggagcgcgcatggtgcgtggcatat
caaaagggaaagaacggagtcgcgcttggatttgacgatggtgctgtcgtcatcaccatg
ggtcgcgaagagccggctgtcagtatggatggtagtggaaagctattatgggccaagaac
aatgatattctcacttcggtcatcaagggcagcgaccagctcaaggatggcgaacggctc
acacttcccagcaaggacctgggctcgactgaactctacccacagtcccttcttcactcg
ccaaacggacgtttcgtggcggtatgcggcgatggagagtacatcatttacactgcgctt
gctctccgtaaccaggctttcggttccgccatggacttttgctgggcctcgaaagagcac
gacaaggactacgccatccgggaatcatccactagcgttaagatttttcgcaacttcaag
gagcggagtgtgctgaacgttggcttttctgctgatggcctaagcggcggtgttcttctc
ggtgtaaagggtcagggtggtattggtctgttcgactgggactctggtgctctagtccga
aggatagaggttgaacccaagagtgtgtactggtccgagagcggcgagctcgttaccttg
gccacagaagacacattctacgtactacgctattcaagagagaactaccttgaggctgtg
cagaacggagaggttgatgaggatggcgccgaatctgcttttgaggtagtatgcgacatt
aatgagagtgttcgcactggtacctgggttggagactgcttcatctacacaaacagcacg
aaccgactaaactaccttgtgggagaccagacatacaccatctcacatttcgactcacca
cactacgttcttggatacctcccccgcgactccaggatctacattgccgacaaggatgtc
aatgttgtttcatttgccttgtctctggccgtggttgagtaccaaacactcattctacgt
ggcgatttggaggccgccgaggaaactcttccatcggtgcccaaggaccagaacaacaag
attgcccgcttccttgaaggtcaaggctacaaggagatggctctcaaggttgccactgat
ccagaacaccgtttcgacctcgctctgtctctaggcgatcttcaacaagccgtatccatt
actcgcgagcaggacacggagcacaagtggaagacagtcggagacgcagcactcacaaac
tgggacgtcaagcttgcccaagaatgcttcgtcaaagccaaggatcttggttccctcttg
cttctctactcggccacatctgacacagccggtctacgcgaactcgccgacctcgccgaa
acctcagccgcaaacaacgtcgccttctctgcgctctggcaaatcggcgacgtccaagcc
tgcatcgacctcctggtcaaaaccaaccgccttgctgaagctgtcctcttctcccaaact
tacaagcccagcgctaccgctggcctcgtcaagcagtggaaagaggccctcgagaaggag
agcaagactaaagtcgctagactccttggaactccgccacatggcgaggacgagggcgac
gcggaaatgttcccagagtgggacgagtatctacggttggagaaggagggcggaactgtg
gaggatcttttggtgcaggaggatgatgaggcggaggcggaggatgcggatgaggagatt
gcggcagatgaggaagaggaggacgaggatgaggaggatgaagatgaggaggaagagagt
gaggaggagaagtag
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