KEGG   Pyrenophora tritici-repentis: 6341478
Entry
6341478           CDS       T10215                                 
Symbol
PtrM4_068740
Name
(RefSeq) WD40 repeat protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ptrr  Pyrenophora tritici-repentis
Pathway
ptrr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ptrr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    6341478 (PtrM4_068740)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptrr03021]
    6341478 (PtrM4_068740)
   03036 Chromosome and associated proteins [BR:ptrr03036]
    6341478 (PtrM4_068740)
Transcription machinery [BR:ptrr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     6341478 (PtrM4_068740)
   Coactivators
    SAGA/TFTC/STAGA complex
     6341478 (PtrM4_068740)
Chromosome and associated proteins [BR:ptrr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     6341478 (PtrM4_068740)
    STAGA complex
     6341478 (PtrM4_068740)
    TFTC complex
     6341478 (PtrM4_068740)
    SAGA complex
     6341478 (PtrM4_068740)
    SLIK complex
     6341478 (PtrM4_068740)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st TFIID_NTD2 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_CDC20-Fz WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_WDR41 WD40_MABP1-WDR62_1st LisH NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Tricorn_2nd WD40_RFWD3 Beta-prop_SPT8 DUF2283 PROPPIN Beta-prop_ELP1_1st Tricorn_N LisH_PAC1 DUF2027
Other DBs
NCBI-GeneID: 6341478
NCBI-ProteinID: XP_001933584
UniProt: B2VXK5
LinkDB
Position
2:<3726080..>3728679
AA seq 729 aa
MSGPPQGPGPVRAMSVGNGPPSAGLPPHSAMPPQGGPPPPGSSGPQSQQNLNQIVLEYLS
KKGYVRTEAMLRKESEPQTNGQPLTAQSTEAGGAKYTKAFELLRKYTEDNLDLYRPELRK
LLWPVFVYSFLDLVRDFYTKDAETFFTAYHGLFERDHDEDVKTLRQVRLQAHLQESRIAK
LYLDNKYRITLTTMPFFNLVQFLESKHFDGGSTIIDVIREHLNIVTVDRTATAEKSIAAI
LASGHGEDELPAEDEGIPGHAPGHPLTTRHDPDADAARIRLQLGAYPQEQELQDDVRAAL
QDEDAKSAPRPGQLSLVEEFEQRIKREPTEDGPSREFVPLPPSLARDVSMEVQKIIEHRD
RYKMEGRTGGVGPAVSVTMYTFHNTYDSINCIDFSGDNQLVAAGMNESYIRVWSMDGSPL
TSPNDTANTQPSSSRRLVGHSGPVTAVAFSPSTANPDPNGPPTNSECLLSCSEDKTVRLW
SLDTYTCLVAYRGHDNPVWDVQWGPYGHYFLTGSNDRTARLWSTDHIEPLRIYVGHDNDV
DCVTFHPNNLYIFTGSCDRTVRMWHIAGGNCLRLFTGHTGNVTAISCSPDGKTLASADDA
GNIILWTLDTGRRKKRMRGHGKGGIWSLSWSVESSVLVSAGADKTVRVWDVLQEPSEKAT
DGVAAKADGAMTTKGASGTTVTGKKTSKETGVSADQISVFPTKESPVYKVQFTRMNLVLA
GGAYLPTRP
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgtcggggcccccgcaagggcccgggcctgtgagggccatgagcgtagggaatggtccg
cccagtgctggcttaccaccacacagcgcgatgcctccgcaaggcggtccaccaccacca
ggttcttctggaccgcaatcgcagcagaatttgaaccaaatagtacttgaatatctctcc
aagaagggctatgtccgcaccgaagcgatgctccgcaaggagtccgaaccgcaaaccaac
ggtcagcctctgacagcgcagagtaccgaagctggcggcgcgaagtacacgaaggcgttt
gagcttctgcgcaaatacaccgaggacaatttggacttgtacaggccggagctacgtaag
ctactatggcctgtcttcgtctactcgttcttggacttggttcgcgacttctacacaaag
gatgcagagacgttctttacggcctatcacggcttgttcgagcgggaccacgacgaggac
gtcaagacacttcgtcaggtgcggctacaagctcacttacaggagagtcgcatagcgaag
ctgtacctcgacaacaagtatcgtataacgctgacaactatgccattctttaacctagtt
caattccttgaatccaagcactttgacggaggttcgacaatcattgacgtcattcgggag
cacctgaacatcgtcacagttgaccgaactgcaactgcggagaaaagcatcgcagccatt
cttgctagcggacatggcgaagacgagcttccggcagaagacgaaggcattccaggccac
gctcccggtcatccgctcaccacgcgccacgatcctgacgccgacgcagcgcgcattagg
ctgcaattgggggcatacccacaagagcaagagctacaagacgacgttcgagctgctctg
caggacgaggacgctaagtccgcgccaagaccaggtcagctgagtttggtagaggaattt
gagcaacgtattaaacgtgagcccacagaggacggtccgtcgcgtgagtttgttcctctg
ccaccctcgcttgctcgcgacgtctccatggaagttcaaaagatcattgaacaccgtgat
cgctacaagatggaaggcagaactggcggtgttggtcccgccgtcagcgttaccatgtac
acctttcacaacacgtacgacagcatcaactgcatagacttttcaggcgacaatcagctt
gtagctgctggtatgaatgagtcttacattcgtgtttggtccatggacggcagtcctctg
acctcccccaacgacactgccaacacccaaccttcatcttctcggcgcttagtcggtcac
tctggtcctgtaactgcagtcgcattctctccgtcgactgcaaaccctgatcccaacgga
cctccgaccaactcggaatgtctgctgtcctgctcggaagataagactgtccgactatgg
tcactggacacatacacttgtcttgtcgcctaccgcggccatgataatccggtatgggac
gttcagtggggaccctatgggcattacttcctcactggctcgaacgaccgcactgcacgt
ctttggtcaaccgatcatattgagcctctgcgcatctacgtcggccatgacaatgacgtc
gattgtgtcactttccatccaaacaacctctacatcttcacaggctcttgcgaccgcaca
gtacgcatgtggcatattgccggtggcaactgtctgcgcctgttcaccggtcacactggc
aatgtcacagccatatcatgttctcccgacggtaagacacttgcgtccgccgacgatgcg
ggcaacatcatactgtggacactcgacactggcagacggaagaagcgcatgcgtggacac
ggcaagggtggtatctggtcgctttcctggagcgtcgagtccagtgtcctagtctctgct
ggagcggacaagacagtacgcgtttgggatgtgctgcaggagcccagcgagaaggctact
gatggtgtggctgcgaaggcggatggtgccatgaccaccaaaggtgcaagcggaacgacg
gtgacaggaaagaagaccagtaaggagactggtgtctcggcagatcagatcagtgtgttc
ccaacaaaggagagccccgtgtacaaggtgcagttcactcgaatgaacttggtccttgct
ggtggtgcatatctcccgactcggccttag

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