Pyrenophora tritici-repentis: 6341539
Help
Entry
6341539 CDS
T10215
Symbol
PtrM4_069400
Name
(RefSeq) TAF1, Transcription initiation factor TFIID, subunit TAF1
KO
K23358
transcription initiation factor TFIID subunit 1, fungi type [EC:
2.3.1.48
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6341539 (PtrM4_069400)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrr03021
]
6341539 (PtrM4_069400)
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6341539 (PtrM4_069400)
Enzymes [BR:
ptrr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
6341539 (PtrM4_069400)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
6341539 (PtrM4_069400)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
6341539 (PtrM4_069400)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
zf-CCHC
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
6341539
NCBI-ProteinID:
XP_065964484
LinkDB
All DBs
Position
2:3890830..3894274
Genome browser
AA seq
1126 aa
AA seq
DB search
MDVDHNPPNGGGGDTSEDDDFQKLLRQAGMGVAEGEVNLLEGITDRPLEIGEKADDAIDY
EDIGDDDLPEEEFESGEGDDAGINFSGTTVQDSGGAPNDDDVNMDDLFGDNVDDDDDLFG
DGMGLSDPIQKSGQHEDDPMNSIEDLVQQAFNSSENDKPQPTAHNAAHGIAQQDLEEEDP
EVREQMALFAQSMRKKDEPAIAHKKTSREEFEKIWPNFEEDKPPRFFSLVPRKRAFYIPK
VPQKAPKSFQMNKLSLDLATDQEKAFRLHPTTTTTAKPGRQQEEEQGGIIHITSVAEEDG
ETDEQLELENLETIDDREMIGNISWSDLRIACEDWEIPDESSVPALADSNQAPSPPDSVD
IDQLSPNKKRKLGSREKPIQFSVYDHMDLPTWDDPELETARLSKKILLDMNDPHLLLDVQ
QPSAEPPKPRTLGLGLKRDSRGSLANPMFKRYNISNDEAYDALKESSQQKVRSTIGHMNV
EHSLPALKLQYPFYKVALSDRELRSFHRPTVTFKPGERASISTLRSVKRKHKKNLKPSEA
FASAEDLNIGDNSDLLLAEYSEEYPTTLSNFGMGVKILNYYRRKDMDDTARPKPEDGIGE
TSVLLPQDKSPFSLFGTVEPGQQVLTLHNAMYRAPVFKHKPEETDFLVSRSYTGVNGNRY
YMRNIPNLMVVGQQFPSVEVPGTHARKVTEASKKRLKMLAFRLYRKGQQKGARQPWVSNE
MIKQHLPGTEIAQNRSRMREIMKYQKDIGTWEPVPGETVPEEPILRTWIKPEDVCLIDSM
HAGDKQLQDAGIKSNEIRDDDDEADNENADVKLAPWNTTKNFLNACAGKAMLELHGDGDP
TGQGLGFSFIKVSMKGGFRDVGESAADRLDNKKMKELGGHSYNVQRQQVMYENAIKRIWN
KQKESLSAQNPPSDTEDDVDSAVARNNLPRQRSEVGTPMMRHDDETMSQMSRNSNADNRG
KKLKITRTIKNQNGEFEDVTEIITDPAVIQLYIKHKRQERLLNMRIEDIKPTGDPEVDKA
QQIKLKTELARLARNIERREGREKAKGLHKSQTGEGGASATGGPGKGGATPRKCANCGEV
GHIKTNKKLCPLLNGQRKQNDTFRDASAASPVTVVPATPSFAGSPS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggacgttgaccacaacccgccgaatggcggcggcggggacacatccgaggacgatgac
ttccagaagctgctacgacaagcgggcatgggcgttgcagaaggcgaggtcaatctcttg
gaaggcatcacggaccgcccgctcgagattggcgaaaaggcagacgatgcgatcgattac
gaagatatcggcgacgacgacctgccggaagaggaatttgagtcgggcgaaggtgacgac
gccggtatcaatttcagcggaaccacggtgcaagactctggtggagcaccgaatgatgac
gatgtgaacatggatgacctgttcggcgacaacgttgacgatgacgacgacctcttcggt
gatggcatgggtctctctgaccccatacaaaagtctggacaacacgaggatgacccaatg
aattctatcgaagacctcgttcagcaggctttcaatagctccgaaaatgacaagccacag
ccgactgcccacaacgccgctcatggtattgcgcagcaggatttggaggaagaagaccca
gaggtgcgcgagcagatggctctgttcgcacagtcgatgcgcaaaaaggatgagccagcc
atcgctcacaagaagacgtcgcgggaggagtttgagaagatttggcccaactttgaagaa
gacaagccaccacgcttctttagcttagtgccacggaaacgtgcattttatatacccaaa
gttccgcaaaaggcaccaaagtcttttcaaatgaacaagcttagcctcgacttggcgaca
gatcaagagaaagccttccgactacatcccacaacaacgacaactgccaaaccaggtcga
caacaagaggaagagcaaggcggaattattcacatcaccagcgttgccgaggaggatggt
gagaccgacgaacagctggaactagaaaacctcgagactatcgacgatcgcgaaatgatt
ggaaacatatcatggagcgaccttaggattgcatgtgaggactgggaaattccggacgag
tctagtgtcccagccctggccgatagtaaccaggcaccaagtccacctgacagcgtcgac
attgaccaactgtcaccaaacaaaaagcggaaacttggcagtcgcgaaaagcccatacag
ttctccgtctacgatcacatggacttgccgacatgggatgacccagagcttgagacggcg
agattgtcaaagaaaattcttcttgacatgaacgacccacatctgctacttgacgtgcag
cagccgagtgctgagccgccaaaaccccgtacacttggcctgggcctcaagcgtgacagt
cgtggtagtcttgcgaaccccatgttcaaacgctacaacatctctaacgatgaggcgtac
gacgcgctcaaggagagcagtcaacagaaggtccgtagtacaattggccacatgaatgtt
gagcatagcttgcccgcgttgaagttgcaatatccattctacaaggtcgcgctgtccgat
cgcgaactgcggtcattccatcgccctaccgttaccttcaagcctggcgagcgagctagt
atctcgacgctcagatctgtcaaaaggaaacataagaagaatctcaaaccgtctgaagcc
tttgcatcagcggaagacctcaacattggcgacaactcggacctccttcttgcagaatac
tcagaagagtaccccacgacgttgtctaactttggcatgggtgtcaagattctcaactac
taccggcggaaagacatggacgatacagcacgaccgaagccagaggatggtattggagag
acttccgtcttgctgccgcaggataagagtcctttctcgctgttcggcacagtcgaacca
ggccagcaagtgttgacactccacaacgccatgtatcgagcaccggtgttcaagcacaag
cctgaagagacagatttcctcgtgagcagaagctataccggtgttaatggcaacaggtat
tacatgcgcaacattccgaacctcatggtcgttggacaacagttcccctctgtggaggtg
cctggcacacatgctcgaaaagtcactgaggcatccaagaagcgactcaagatgttggcg
ttccgactttaccgcaagggacaacagaagggtgcacgtcagccttgggttagtaacgag
atgatcaagcagcatctgcccggtaccgagattgcgcaaaatcgttcccgaatgcgagaa
atcatgaagtatcaaaaggacattggtacttgggaacccgtacctggcgagaccgttccc
gaggagccaattcttcgcacttggatcaagccagaggatgtctgtttgattgactcgatg
catgctggcgacaagcaacttcaagatgctggtatcaagtctaacgaaattcgtgacgac
gacgatgaggctgataacgagaatgctgatgtcaagttggcaccttggaacacgaccaag
aacttcttgaatgcctgtgcgggcaaggccatgttggagcttcacggtgacggcgaccct
actggtcaaggtctgggctttagtttcatcaaggtctcgatgaagggtgggttcagggat
gttggcgagagtgcagcagatcgtcttgacaacaagaagatgaaagaacttggtggtcac
agctacaacgttcagagacaacaagtcatgtacgagaatgctatcaagcgaatctggaac
aaacagaaggagagtttgtccgctcagaacccgccctccgataccgaagatgacgtcgac
tctgccgtggcccgcaacaacctaccccgccagcgctccgaagtaggaactcccatgatg
cgtcatgacgatgaaaccatgtcccagatgtctcgcaatagtaatgcagacaaccgcggc
aagaagctcaagatcacacgcaccatcaagaaccagaacggcgagtttgaggacgtaaca
gagatcatcaccgaccccgccgtcatccaactatatatcaagcacaagcgacaagagcgc
ctcctaaacatgcgcatcgaggacatcaagcccaccggcgaccccgaagtcgacaaggcc
cagcagatcaagctcaaaaccgaactcgcccgcctcgcccgcaacatcgaacgacgcgag
ggccgtgaaaaagcaaagggactgcacaagtcacagacaggcgagggcggcgccagtgca
acaggtggaccaggaaaaggtggagctacacctcgcaagtgcgccaattgcggcgaggtt
ggccacatcaagaccaacaagaagctctgccccctcctcaacggccagaggaagcaaaac
gatactttcagggacgcaagtgctgcttcgcctgttactgtcgttcctgctaccccttct
ttcgccggctcgccttcttag
DBGET
integrated database retrieval system
