Pyrenophora tritici-repentis: 6341931
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Entry
6341931 CDS
T10215
Symbol
PtrM4_096150
Name
(RefSeq) AcuC, Deacetylase
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptrr01009
]
6341931 (PtrM4_096150)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6341931 (PtrM4_096150)
04131 Membrane trafficking [BR:
ptrr04131
]
6341931 (PtrM4_096150)
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6341931 (PtrM4_096150)
Enzymes [BR:
ptrr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
6341931 (PtrM4_096150)
Protein phosphatases and associated proteins [BR:
ptrr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
6341931 (PtrM4_096150)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
6341931 (PtrM4_096150)
Membrane trafficking [BR:
ptrr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
6341931 (PtrM4_096150)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
6341931 (PtrM4_096150)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Motif
Other DBs
NCBI-GeneID:
6341931
NCBI-ProteinID:
XP_065962839
UniProt:
A0A2W1DTE9
LinkDB
All DBs
Position
4:2171413..2173350
Genome browser
AA seq
603 aa
AA seq
DB search
MEDEDYTMGDDSIIVSTEPNGDHAPNTVVPSDIFGNSKGLMFTKHEQLPFHSPSKAPSLL
QPSAQKSSPGPHRTTKSPSAWSDKMSMSRPTPVRRTSPQVRIPPKPTSSALAYATSKTGL
VYDPRMRFHAELPDMNINPDDIHPEDPRRIHSIFKEIKEAGLVASSTSEEDQQDHCWRIA
TRYATKPEILLIHTEEHYDFLKEQAEGLDSIYFNHSTFECAKLAAGGAIEACKAVVQGHV
RNAIAIIRPPGHHAETDSPSGFCIFNNVPIATRVCQKAYPETCRKVLILDWDVHHGNGIQ
HAFYNDPNVLYISLHVFKGGNFYPNLPDGDLNYCGEGPGEGKNVNIPWADHGMGDAEYLY
AFQEVVMPIATEFDPDLVIISAGFDAAEGDLLGGCFVTPACYGHMTHMLMRLAKGKLVVC
LEGGYNLRSIARSALAVTRVLMLEPPDRLHIDLPGPKDSAVHTVENVKREHSRYWKSLYP
KHLDKADPGYKDTCRLHEIIREWQSQRLASEHSMVPLPPLYINKAGLTQTFSHNIIATPR
FMDRYPLLVIFHDPPGFQDYPDPVTGKNELHNTWLVSISTVSYCVIADFGRRLMSPRGTL
TGP
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaagactacaccatgggagatgactcaatcatcgtctcaacagagcccaac
ggtgatcacgcaccgaataccgttgttccatcggatatttttggcaatagcaaaggacta
atgtttaccaaacacgagcagctgccatttcatagcccatcaaaggcgccttccttactg
caacccagtgcccaaaaaagtagtcctggacctcatcgaactaccaagtcgcccagtgca
tggtccgataagatgagcatgtcgcggccaacaccggttcgacgcacgagcccgcaagtt
cgtatacctccaaagccaacctcgtctgcgcttgcgtatgcgacatcaaagacaggtctg
gtgtatgaccctcgtatgcggtttcacgcagaactcccagacatgaacatcaatcccgac
gacatccatcctgaggatcctaggcgcatccactcaatcttcaaggaaatcaaagaagct
ggtcttgtcgcatccagcacttctgaggaagatcaacaagaccattgctggaggattgcg
acacgatatgccacaaagcccgagatattgctcatacacaccgaagagcactatgatttt
ttaaaggagcaggcagaagggcttgactcgatttacttcaatcactccacgtttgagtgc
gcaaagcttgcagctggcggcgccattgaagcctgcaaagcggtagtacagggtcatgtg
cggaacgcaattgccatcatccgtcccccggggcatcatgcggagaccgactcgccatcg
ggcttttgcatattcaacaatgttccaatagccactcgcgtatgccagaaagcttaccca
gagacctgtcgcaaggtcctgattctcgactgggatgtgcatcatggaaacggtatccag
cacgccttctacaacgatcccaacgtgctctatatctcattacatgtgttcaagggtgga
aacttttacccaaacttacccgatggggatctcaattactgcggcgaaggcccaggagaa
gggaagaacgtaaacattccatgggctgaccacggcatgggtgacgcggaatatctttat
gctttccaagaggttgtcatgcctatcgctaccgagttcgatccagatcttgtaattata
tcggctggtttcgatgcggccgagggggacttgttaggcggatgtttcgtcacgcctgca
tgctacgggcacatgacacatatgcttatgcggttagcaaaaggaaagcttgtggtgtgt
ctcgaaggcgggtataatctacggtctatcgcacgttcagcactagcagtaaccagagta
cttatgctggagcccccggatcgcttacatattgatctgccaggcccaaaggacagcgca
gtccataccgtcgagaacgtgaaacgagaacactctagatactggaaatccctctacccg
aaacatctggacaaggcggatcctggctacaaggacacatgtcgattgcacgagatcatc
cgggagtggcagagtcaacgcttggcttcagaacactccatggtcccgcttcctccactt
tatatcaacaaggcgggcttgacgcaaactttttcgcataacattatcgctacacccagg
ttcatggaccgttatcctctcctcgtaatattccatgatccaccgggattccaggactat
cccgatcccgtgactggaaagaacgagttacataacacctggctcgtaagtataagtaca
gtctcatactgtgtaatagctgactttggacgaagactgatgtcaccaagaggtacattg
actgggccataa
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