KEGG   Pyrenophora tritici-repentis: 6342072
Entry
6342072           CDS       T10215                                 
Symbol
PtrM4_094770
Name
(RefSeq) WD40 repeat protein
  KO
K14298  mRNA export factor
Organism
ptrr  Pyrenophora tritici-repentis
Pathway
ptrr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ptrr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    6342072 (PtrM4_094770)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptrr03019]
    6342072 (PtrM4_094770)
   03036 Chromosome and associated proteins [BR:ptrr03036]
    6342072 (PtrM4_094770)
Messenger RNA biogenesis [BR:ptrr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     6342072 (PtrM4_094770)
Chromosome and associated proteins [BR:ptrr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    6342072 (PtrM4_094770)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_EML_2 WD40 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR5 WDR55 WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_Vps41 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IFT140_1st EIF3I Beta-prop_SPT8 Beta-prop_ACSF4 Beta-prop_CAF1B_HIR1 WD40_Gbeta NBCH_WD40 Beta-prop_RSE1_2nd eIF2A Beta-prop_NUP159_NUP214 Tricorn_2nd Beta-prop_VPS8 Beta-prop_At4g14310 Cadherin_4 Beta-prop_IFT80_2nd Pep3_Vps18
Other DBs
NCBI-GeneID: 6342072
NCBI-ProteinID: XP_001934169
UniProt: B2W338
LinkDB
Position
4:complement(<1789827..>1791026)
AA seq 362 aa
MTLFGQAAAPAASSTTGDTSKDVEVPQGQVPSDSVSDLQFSPTNDFLAVGSWDKKVYIYE
VNQNGANGKWMFECQGPVLGLGWSKDGTRIAAGDATGMLNIVDFRTAPASGTVPAQQAKA
HENGIKCVRWFQTGGKDYVATGSWDKTVKFWDLQGAEPVGTLQCQERVYSMDIKDQLLVI
ATAERHIHMVNLTNPTAIYKTITSPLKWQTRVVSCFSDATGFAVGSIEGRCAIQYVEEKD
TSLNFSFKCHRQTDTSNRDIAKVFSVNAISFHPQHGTFSTAGSDGTFHFWDKDAKHRLKG
YPEVGGSIVATAFSKDGNIFAYAISYDWSKGYSGNTPQYPTKIKLHPILGDECKPRPNSR
KK
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgactctctttggtcaagccgcagcgcctgctgctagctctaccacaggcgacacaagt
aaagacgtcgaggtcccacaaggccaagtacccagcgacagcgtgtccgatctgcagttt
tccccgacaaacgacttcctcgccgtaggaagctgggacaagaaggtctacatctacgag
gtcaaccagaatggcgcaaacggaaaatggatgttcgaatgccagggtcctgttcttggt
ctgggatggtcaaaggatggcacacgtatagcagcaggtgacgcaaccggtatgctcaat
attgttgacttccgcaccgcccccgccagcggcactgtcccagcccagcaagccaaggcg
cacgagaatggcatcaagtgcgtgcgctggttccaaactggtggtaaagactacgttgcg
accggctcatgggacaagactgtcaagttctgggatctgcaaggcgccgagccagtcggt
acgctgcaatgccaggagcgcgtgtacagcatggacatcaaggaccagctgctagtgatt
gcgacagcagagcgccacatccacatggtcaacctcacaaacccaaccgccatctacaaa
accatcaccagcccgctcaagtggcaaacaagagtcgtcagctgcttcagcgacgcaacc
ggtttcgccgtcggctccatcgaaggccgatgcgcaatccaatacgtcgaagaaaaagac
accagtctaaacttctccttcaaatgccaccgccaaaccgatacaagcaaccgcgacatc
gcaaaagtcttctccgtaaacgcaatctctttccacccccagcacggcacttttagcacc
gccggctcagacggcaccttccacttctgggacaaggacgcaaagcaccgtctcaaaggc
taccctgaagtcggcggcagcatcgtcgctactgccttctccaaagacggaaatatcttt
gcctatgctatcagctacgattggagtaagggatacagtggtaacacgcctcagtatccc
actaagattaaacttcatcctattctgggcgatgaatgcaaacctaggcctaatagtagg
aagaagtag

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