Pyrenophora tritici-repentis: 6342315
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Entry
6342315 CDS
T10215
Symbol
PtrM4_091790
Name
(RefSeq) mediator RNA polymerase II transcription subunit 5
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrr03021
]
6342315 (PtrM4_091790)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
6342315 (PtrM4_091790)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med5
VitD-bind_III
Motif
Other DBs
NCBI-GeneID:
6342315
NCBI-ProteinID:
XP_065962637
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Position
4:<1082522..>1085988
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AA seq
1042 aa
AA seq
DB search
MESVVDEWKAFLSRCIASRIPPDVFAAAVAQLHAKSPLPGRKLAALVLLPRAAGIDPRSI
AILEQLLALKKVDASDVLTVTFLHSKDRRPINTGDEKAPKDAQWSNPPELEEIIFHRLHK
AFASEERPVNNTEGLRTLIVVTRWMQVMVTSHTSDTMIQAMAGIQQPHQQSINAREGLAM
LVIGVIENPRILAILSNPKGKDVRKNFVQSLSSFIPFLHNNSAGSQTSLSLANRLEMSQK
QHDFFEKLPNVNGERNESTGLEVAALQLDAVMELPQVNTRPGLYVFLNALLVARPLTDDF
TIISHLHSRYKVGYPLGIPQGSDLQQLEPQNMATDLITAAFDILANAMYRNEQSETLFYL
KSFLINKVPILLTQLSGSIFPMTVEMCITQALSHVDPHAFPSFSQGFDDIMGSNNSLSDV
RQDFLNACALHGLIAAGTVERLLGEAPMQGPPAKRYERKELLNQCKTNFDKISLYIDELE
NVDGNAGAIVAAVTDFIAHLCETQTTMYLKQLSCLIFRKPQAMDVMLQFTSPPSILRPLC
QFLDDWHYDSDQGEHQPVYDEFGAILVCIMTFMYRYDLTYHDIGIGHDSFVAKLMQRGHH
GMLPDELTEEQGKHLGNWLKGLYDSDKEGLSNEVFASCRPQEFYLTVPTLFRQTVVACST
GVLSFETVKGGLEYLGETFLLPSLIGGLTWMASYALLQTHNDLDAMIRIFNEVILSSPTS
GDAQAMHSTIIAIVSSRLEKCFRTLQRREPNRTTLEPFIQAIKAHSHYERTAYATLKELD
QWTNVPHSTLNTSLRHTVQQLSQWASTASLQPNPPSYTHRQIYASLKMLGATRTLRAIVE
EVKNQTDAGNGAAALDIGISIICAPMVEDSPVSVDWVASQIVAPAPQRTRMNLREILKQE
FDCAANLVATDPLTAETIVRLHRRVEAHFASLSETGLQAPPINIPSVHIGDMQSQTISDD
LNRAIDDAAAASIVEDISNMDNKALQRSMDELTASEGLDLSSIGMGNGDSGTGDMGTDLG
NLPDLDLGGGGDDDWGLDFDNM
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgtggtcgatgaatggaaagcgtttttgtctcgctgtattgcgagccggatt
ccaccagacgtcttcgcggccgcagtcgcgcagctccacgcgaagtctcccctgccaggt
cgaaagcttgctgccctggtgcttctcccacgcgctgcaggcatcgacccgcgttccatt
gcgattctcgaacaattactagccttgaaaaaggtcgacgcatctgatgtcttaacggtg
acctttttgcactccaaggatcggcgtccgattaacacaggggacgaaaaggcacctaaa
gatgcacaatggagcaaccccccagaactagaggagattatttttcatcgactgcacaag
gcctttgcctcggaggagcgtcctgtcaataatactgaagggctgcgcacgcttattgtc
gttacaagatggatgcaggtaatggtgacatcgcataccagcgataccatgatccaggcc
atggctggcatacaacagccacatcagcagtccatcaacgccagagaaggccttgccatg
cttgtaatcggtgttatagaaaacccaagaatattggctatcttgagcaatcccaaaggc
aaagatgttcgaaagaatttcgttcagtcgctgtcctcgttcattcctttcctccacaac
aactccgccggatcacaaacatccttgtcattagcaaatagactagaaatgtcacaaaag
caacacgacttcttcgagaagcttccgaatgttaacggtgagcggaacgagagtaccggt
ctggaagttgctgcattgcaacttgacgcggtgatggagcttccccaggtcaacacgcgg
cctggtctttatgtgtttctgaacgccttgcttgtcgcgcggcctctgactgacgacttc
acgatcattagtcacctgcattcacgatataaggtaggctacccattgggtattccacag
ggttctgacttgcagcagttggagcctcagaatatggcaactgatttgatcactgctgcg
ttcgatatcctcgcaaacgccatgtaccgcaacgaacaatcagaaacgctgttctacttg
aagtctttccttatcaacaaggtgcccatacttctcacgcaattgtccgggtcaatattc
ccaatgacagttgagatgtgtatcacccaggcactcagtcatgtcgatccccatgctttt
ccgtcattctcgcaaggtttcgacgacatcatggggagtaacaactccctttctgacgtt
cgacaagatttcctcaatgcctgtgcactccatggcctcattgcagcgggtaccgtggag
cggttgctgggcgaagcccccatgcaaggaccgccagcgaagagatacgagaggaaagaa
ctgctgaatcagtgcaaaacaaactttgataagatcagcttatatattgacgaacttgag
aatgtagatggtaatgccggcgccatcgtcgccgcagtcacagattttatagcacacctc
tgcgagactcagacgactatgtatctgaagcagttgtcctgcttgatcttcaggaagcct
caggcaatggacgtgatgcttcaattcacctccccacccagcattttgcggccactatgc
cagttcctcgacgactggcactatgatagcgaccaaggtgagcatcaaccagtctacgat
gaatttggtgcgatactcgtttgtataatgacgttcatgtaccgttacgatctgacgtac
cacgacatcggtattggacatgactctttcgtcgctaaactcatgcagcgcgggcaccat
ggtatgctgccagatgagttgactgaagagcagggaaagcaccttggtaattggctaaag
gggctctacgactctgacaaggaaggacttagcaatgaggtgtttgcttcttgtcgccca
caggagttctatctgacagttccaacattattcagacagacagtcgtggcttgttctaca
ggcgtgttatctttcgagaccgtcaagggtggcttggagtatctcggagaaacattcctt
ttgccgtctctaatcgggggtctcacctggatggcttcctatgcgctcttacagacccat
aacgaccttgatgcgatgatacgcattttcaacgaggttatactctcaagtccaacatcc
ggtgatgcacaggctatgcactcgacaattatagcgatagtatccagccgcctcgagaaa
tgcttccgcacactgcagcgccgcgagccgaatcgcactactctggagccatttattcaa
gcgatcaaggcacactctcattacgaacgtaccgcatatgccaccttgaaggaacttgat
caatggacgaacgtgccccatagtacactgaatacatctcttcgacatactgtacagcag
ctgtcgcagtgggcttccactgcatcattacagccgaatccgcccagctatacccatcgt
cagatctacgcttcgctgaaaatgctaggcgcaactaggacgttgcgggccatcgtagaa
gaggtaaaaaaccaaacagatgctggcaacggtgcagctgcacttgacattggtatctcc
ataatttgtgcgcctatggtagaagatagcccagtatcagtagactgggtggccagccag
atagtggcaccagcgccacagcgaactcgcatgaatctgagggagattctcaaacaagag
ttcgactgtgcggcaaacctcgttgcaacagacccgctaacagcagaaacaattgtacgc
ctacatcgtcgtgtggaagcacactttgcctcactcagcgagaccggacttcaggcacca
ccaattaacatccctagtgtacacattggagatatgcagtcgcaaacgatctcagacgac
ttgaatcgagccattgacgatgcggcagcggcaagtatcgttgaagacatttccaacatg
gacaacaaagcgcttcaaagaagtatggatgagcttaccgcatccgaaggtctggatttg
tcgagcatcgggatgggcaatggcgattcagggacgggcgatatgggtacggatctgggc
aacctacctgacttggacctgggtggcggaggtgatgatgactggggattggactttgat
aacatgtag
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