Pyrenophora tritici-repentis: 6342455
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Entry
6342455 CDS
T10215
Symbol
PtrM4_090370
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03008
Ribosome biogenesis in eukaryotes
ptrr03013
Nucleocytoplasmic transport
ptrr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6342455 (PtrM4_090370)
03008 Ribosome biogenesis in eukaryotes
6342455 (PtrM4_090370)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
6342455 (PtrM4_090370)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6342455 (PtrM4_090370)
03009 Ribosome biogenesis [BR:
ptrr03009
]
6342455 (PtrM4_090370)
03016 Transfer RNA biogenesis [BR:
ptrr03016
]
6342455 (PtrM4_090370)
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6342455 (PtrM4_090370)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
6342455 (PtrM4_090370)
Ribosome biogenesis [BR:
ptrr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
6342455 (PtrM4_090370)
Pre-60S particles
6342455 (PtrM4_090370)
Transfer RNA biogenesis [BR:
ptrr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
6342455 (PtrM4_090370)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
6342455 (PtrM4_090370)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
SPX
IBN_N
FAM13A
Pre-PUA
mTOR_dom
TPR_TNPO3_IPO13_3rd
MutS_II
DRE2_N
PFam54_60
GAS
Motif
Other DBs
NCBI-GeneID:
6342455
NCBI-ProteinID:
XP_065962588
UniProt:
A0A2W1END3
LinkDB
All DBs
Position
4:<695500..>701447
Genome browser
AA seq
1199 aa
AA seq
DB search
MSLSIEELDATVRAFYEGRGDTQKQAQATLNQFKENPDAWLLVDKILSDAQYPQTKYLGL
QVLDNVIMTRWKVLPRDQCQGIRNFIVNFIIQLSNNEDSRRTERTLLNKLNLVLVSVLKQ
EWPHNWPTFINEIISSCHSSLGICENNMVILRLLSEEVFDYSEEQMTSAKRRELKQSMCD
EFTAIYQLCSEVLRTATEASLIKATLETLLRFLNWIPLGYIFETPPSGQSLIETLRSRFL
EVPDFRNITLKCLTEIAGLHTEPAYDDKLVSMFTETLTAISKIIPLSLDLKSTYSSSNGR
DQEFVLNLALFLTNFFTMHLNVIENLMNRDFLTHGHFYLIRISQIDDREVFKICLEYWTK
LVSELYDEMQALPITDMNPLLNMGIPGNGARELANYPLRKNKYTEILSNLRTVMIEKMVR
PEEVLIVENDEGEIVREFVKESDTIQLYKSTRECLVFLTHLDVNDTEQIMSEKLARQVDG
SEWSWANCNTLCWAIGSISGAMNEETEKRFLVTVIKDLLGLTEMKRGKDNKAVVASNIMY
IVGQYPRFLKAHWKFLKTVVNKLFEFMHETHEGVQDMACDTFIKIANKCRRHFVALQPGE
TEPFIDEIVRNLRKITADLSPQQVHTFYEACGYMISAQGQKSMQERLIADLMALPNSAWD
NIIAQANQNPACLQDSDVIKIVGNIMKTNVAACGSIGSYFYPQIGRIYFDMLTMYRASSQ
LIDEAVQREGNIATKMPKVRGLRTIKKEILKLINTYVEKADDLEMIHNNIVPKLLEAVLI
DYKNNVPDAREAEVLNVMTTIINKLHSMMEDQIINIMDSVFECTLDMINKDFSEYPEHRV
EFFKLLRTINLRCFPALLRLDARSFKFVIDSCMWASKHDNREVESAGLSMCFELVSNMAE
TDQQTCNAFFQTFFTTILQDVFFVVTDSDHKAGFKSQSMLLAKMFWLVDSDKLQGPIYTS
PDMAAPGTPNREFLRNFVGNLLATAFPNLQTAQIASFIDGLFATNSDLNRFKVILRDFLI
SLKEFSARFSRKFGKHIQKRQLEIPEYAASFVDYKALKKLIKKLSATPIIPPQGDSSHHD
TLDPQTSLQANKATFFFRVERELEKVNTFYLQKEAELRLRLTTLLDKKRVMQQHPQSVSK
TSSRYVALEEGLKQFSMDLNKLEQFVEVNETAFSKILKKWDKTSKVCTISLCNCRHWLT
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtccattgaagagctcgacgctacagtgcgcgccttctacgagggccgtggc
gatacgcaaaaacaagcccaagccactctgaatcagttcaaggagaaccccgatgcatgg
ctgctggttgacaagattctgtcggatgcgcaatacccgcaaactaagtatctcgggctc
caagttcttgacaatgtgatcatgacgagatggaaagtgctgccccgcgatcagtgtcaa
ggaatccgaaatttcatcgtcaactttatcattcaactgtccaataacgaagacagccgc
cgcaccgagcgaactctccttaacaaactaaacctcgtcctcgtgtccgttttgaagcag
gaatggcctcacaactggcccacgttcatcaacgagatcatatcgtcatgccacagcagc
ttgggcatatgcgagaacaacatggtcattctgcgattactttccgaagaagtctttgac
tactccgaggagcagatgacgtcggccaagcgtagagagctcaagcagagcatgtgtgac
gagtttactgccatctaccagctctgttccgaggtcttgcgcacagccaccgaagcctca
ctcatcaaagccacactcgagaccctcctgcgcttcctcaactggattcctctgggatac
atcttcgagacgccacccagcggccagagcctcattgagacgttacgaagccgcttcctc
gaagtgcccgacttccggaacatcaccctcaagtgcttgacggagattgccggtctgcat
acggagcctgcgtacgacgataagctcgtctccatgtttactgaaacactgacggccatt
tccaagatcattcctctctcgctagaccttaagagtacatactcatccagcaatggccgg
gaccaggaattcgtgctgaacctcgcactcttcttgaccaacttcttcaccatgcacctg
aacgtcattgaaaatctcatgaaccgggacttcctcactcatgggcatttttatcttatc
cgtataagtcagattgacgaccgcgaggtcttcaagatctgcctcgagtattggaccaag
ctggtatcagagctgtacgatgagatgcaggctctcccgattactgacatgaatccgctc
cttaacatgggaattccaggaaacggagctcgcgagctggccaattaccctctgaggaag
aacaagtacaccgagattctatccaacctccgtacagtcatgattgagaagatggtccgt
cctgaggaagtccttatcgtcgagaatgatgagggcgagattgtccgcgaatttgtaaaa
gagagtgatacgattcagctgtacaagtctactcgagagtgcctcgtcttccttacccac
ttggatgttaacgacaccgaacaaatcatgtcggagaaactggctcgccaagttgacggt
tcagaatggtcatgggccaactgcaatactctctgctgggctatcggatccatctcgggc
gccatgaacgaagagacagagaagcgcttcttggtcactgtgatcaaggatctgcttggc
ctgaccgagatgaagcgaggcaaagacaacaaagctgttgtcgctagtaacatcatgtac
attgtcggccaatatcctcgctttctcaaggctcattggaagttccttaagacagtcgtc
aataagctgtttgagttcatgcacgaaacccacgagggagttcaggacatggcttgcgat
accttcatcaaaattgccaacaagtgccgccggcatttcgttgctctgcagcccggagag
accgaacccttcattgacgaaatcgttcgcaatctccggaaaatcactgcggatctttca
ccgcagcaagtgcacaccttctatgaggcctgcggttacatgattagtgcccaaggacag
aagagtatgcaagagcgcttgatcgccgacttgatggctctgccaaactcggcctgggac
aacatcattgctcaagccaaccaaaaccccgcttgtctccaggattcggacgtcatcaag
attgtcggcaacatcatgaagactaacgttgcagcgtgcggttcaatcggttcctacttt
taccctcagatcggacggatatacttcgacatgctgacaatgtaccgtgcgagctcacaa
cttattgatgaagcagtccagcgggagggcaacatcgcgacaaagatgcccaaggtccgc
ggccttcgcacgatcaagaaggagatcttgaagctcatcaacacttacgtcgagaaagcc
gacgacttggagatgatccacaacaacatcgtaccgaaattgttggaggctgtcttgatc
gattacaagaacaacgtcccggatgctcgtgaagcagaagtattgaatgttatgacaact
atcatcaacaaactacatagtatgatggaggaccaaatcatcaacatcatggacagcgta
tttgagtgcacgttggacatgatcaacaaagatttctcggagtaccccgaacatcgtgtg
gagtttttcaagcttctccgcactatcaaccttcgctgcttcccagctctgctacggctc
gatgcacgatcatttaaattcgtcattgactcgtgcatgtgggcaagcaagcacgacaac
cgcgaggtcgagagcgctggtctctccatgtgctttgagcttgtctctaacatggctgaa
actgaccagcagacctgcaacgccttcttccagaccttcttcaccacgatcctccaggat
gtcttcttcgtggtcaccgacagtgatcacaaggctggattcaagtcgcagtcgatgctg
ctggccaagatgttttggcttgtcgactccgacaagttacaaggcccaatttacacatcg
cctgacatggcagccccaggcacaccaaaccgagagtttctccgtaactttgtcggcaac
ctcttggccactgccttccccaacttgcagactgctcaaattgcatcgttcatcgacgga
ctatttgccaccaactctgatcttaacaggttcaaggtcattctgcgtgacttcttgatc
tctctgaaggagttctctgcccgcttctccaggaagttcggcaagcacatccagaagaga
cagctggaaatcccggaatatgccgccagctttgtcgactacaaggcgctcaagaagctt
atcaagaagcttagcgctactccaataatacccccgcagggcgacagcagtcaccatgat
acactggatccgcaaacctcgttacaggccaacaaggctacctttttctttcgagtggag
cgcgaactcgagaaagttaacacattctacttgcaaaaagaagcagagttgcgtctgcgt
ttaaccacccttcttgacaagaagagagtcatgcagcaacatccgcaatctgtttcaaag
acatcttcgcgctatgttgcccttgaagagggactaaagcagtttagcatggatcttaac
aagctcgagcaatttgtggaagtgaacgaaactgcattctcaaagattttgaagaagtgg
gacaaaacgtcaaaagtctgcacgatcagcctgtgcaactgtcgacattggctgacttaa
DBGET
integrated database retrieval system
