Pyrenophora tritici-repentis: 6342660
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Entry
6342660 CDS
T10215
Symbol
PtrM4_088130
Name
(RefSeq) Nucleoporin-C multi-domain protein
KO
K14300
nuclear pore complex protein Nup133
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6342660 (PtrM4_088130)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6342660 (PtrM4_088130)
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6342660 (PtrM4_088130)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6342660 (PtrM4_088130)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
6342660 (PtrM4_088130)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
6342660
NCBI-ProteinID:
XP_065962493
LinkDB
All DBs
Position
4:complement(<135920..>140167)
Genome browser
AA seq
1362 aa
AA seq
DB search
MFSPEASIQSARSSLRNPRRRQRKDSDGPQQQRSRKRSKLNDDSFKDPAVPHMNGNGSAL
INGHAVQSPENSVVLVDMPVREKKTAPKRAPKEDTGSYLTKNANYSVKKLPGFPSALLRP
STPIYATALPSAGLALALTHERALVWDYSAPSGPTKVISLNLNFGLKSIEPLPLGAIVRN
GPTNDYGVVALAPSTGKIGFWENIDSADTQSLYPQRQQGVEGFVKLYSGETITNLVDVDH
AGYVLVFSSGRLAQLTLRDSQGRPNVTTAVLSAPNGSGGSFFSFKGLLGAAIRKTIASVK
ARTSQSKGHMDVISVTKNALFQTWDLSWSGQHNHQRDVDVHDAILSAVQARTAPEIRSQH
QIQVLDFAIMDAQQGQEAVDLLVLVALSGHDSLDYFLLEVELSRTEGTINRTIPIRNFQQ
PQLQKEPTGTLLLPQPGHTAYVQFPGAMFVASLAQPQESPEAQLLADSGSLVLPFQDTVY
FRPDVTLSGTVMDTTARKDKRATALIFAQQFGILQISALPPATDDEDKERLKVTARSKLE
QATFFSMVPGNIIDFSVKSRFSFAEEETAQAALAISAGILSSSYDYLEKAISNMDEQFQK
RATALQTLVSQLQTEYPPMSFQTKWQLLWHAEKLIAAHKLWNWYQDKLQDQQANPDAYPE
NILMSDIVRALNERYKTAINREHGETDSIRQFFLKDVDSIQTLIPWGWFYLRTFYMKEGA
KETPSVMQRLSEGADVMLVVLETAFEFRQANIEAYGLESDSLDDGILKAEYGYDMLPQFW
TSSHNIVSSLRSFIDVGRNLAVENYEEGYQELLAQKIGKDNPRLVKLGCQTHIERFQWAL
AQSDEKTRAMGRSLKDEWNNNVRPSHIMGLMEIGLATEGMKLAEQYHDMSTLVNLIWEET
TWLESEKASTRSKMEQAESTVKLNRIKERIARYFEVYGDDWADAFYSKYIRQNQAGQLFT
KEYLNQPALTRFLRAEPSRVRLGWINEVWGEKNYEAAAEALYEAGSKQETNSWCQRVELS
MAKLALLCKKEAKPGHEQQLLADARREKPKALKVREAMFQSIEQQLEYTKIQEEVYERLL
PIITGALDEDSAVDLLMAEFGQGRLRDRPAHQSILRQGLENLVRHQVIDPALMIDILTLM
NADDSEDGITLLQGDEFIYAFRVLLVNWNNIHRTTRDGLVKLVWKRLLLKDDWATINNTK
EITDAKINEMLQDTALVYTFRELGRLCAGNSFARVVLPKNLQELLGAGGTHGELCVRFAA
EDLREPIIKDNLLDDDTLREHLDKNRLVHWFSAAYQAAKLVMSEQGKSQNGPAGAPMMGN
GVAPETRTEAEADLDREAAGSDTFDGDDESALDHDDVEMRDL
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgttctcacccgaggcttccattcagagcgcgcgcagctctctgcgcaacccccggcgc
cgccagcgcaaggactcggatggccctcagcaacaacgaagtcggaagcgcagcaagctc
aacgacgacagcttcaaggacccggccgtcccccatatgaatggaaatggaagcgccctg
ataaacggccatgccgtccagagccctgagaattcggttgtgctggtcgacatgcccgtt
cgcgagaagaagacagctccaaagcgcgcgcccaaggaagacacgggctcgtatctcacc
aagaatgcaaactacagcgtcaagaaactccccgggttcccgtcagcactactccgccct
tccactcccatatatgcaactgctcttccatctgccggccttgcgctcgccctcacacac
gaacgcgccctcgtctgggactacagcgccccgagcggtcctaccaaggtcatctcccta
aacctgaacttcggtctgaaatcgattgagcctttgcctctgggcgccatcgttcgcaac
ggtcccacaaatgactatggtgttgtcgcactcgcaccgtcaacaggaaagattggcttt
tgggaaaacatcgacagcgccgacacgcaaagcctatatcctcagcgacagcagggagtc
gagggattcgtcaagctatactctggagagactattaccaacctggtggatgtcgaccac
gcgggctacgtactcgtcttcagcagcggcaggctcgctcaattgaccctgcgcgattcc
caaggcagaccgaatgtcacgacggccgtattgagcgcgccaaatggctcgggaggaagc
ttcttcagcttcaaagggcttctgggagcagctattcgcaagaccatagcttcagtcaag
gcacggacatcgcaatccaagggacacatggacgtcatttccgtcacaaagaacgccctc
ttccagacgtgggatttgagttggtcgggacaacataatcatcagcgagatgtggacgta
cacgatgccattctctcagcagtccaggctcgcacagcgcccgagatacgcagccagcac
cagatccaagtgctggactttgccattatggacgcacagcagggccaggaggcggtcgac
ctacttgttctggtggctctgtctggacatgattcattggattactttctactcgaagta
gagctatctaggacagagggtaccatcaacaggaccataccgatccgcaacttccagcaa
ccccaactccaaaaggaacctactggaacgcttctgcttccgcaacctggacacaccgca
tacgttcaattcccgggagccatgttcgttgcgtccctcgctcaaccacaggagagcccg
gaagcacagctgctcgcagactctggtagtcttgttttgccgttccaagacactgtatac
ttccgcccagatgtgactctctctggcaccgtcatggatacaacagcacggaaagacaag
cgagcgaccgcactcatctttgctcagcagttcggaatcttgcagattagtgcgcttcca
ccagcgacggacgacgaagacaaggaacggctcaaggttactgcgcgcagcaagctcgaa
caagctacatttttcagtatggtccccggcaacatcatagacttctccgtaaagtcacgc
ttttccttcgccgaagaagagactgcccaggctgctctcgccattagtgctggcattcta
agctcttcctacgactacctagagaaggccatctcgaacatggacgaacaattccaaaaa
cgcgccaccgcactacaaaccctcgtctctcagctccagactgagtatccaccaatgtcc
ttccagacaaagtggcagctcttgtggcatgcggaaaagctgatagctgcacataagcta
tggaactggtaccaggacaagctgcaagaccaacaagccaacccggatgcttacccggag
aacattctcatgagcgatattgttagggctctcaatgaacgctacaagacagccatcaac
cgtgagcatggcgaaactgacagcatccgacaattcttcctcaaggacgtcgactctatc
caaaccttgatcccatggggctggttctatctgcgaaccttttacatgaaagagggtgca
aaggagacaccatcagtaatgcagaggctgagtgagggtgctgatgttatgctcgtcgtt
ctggagacagcctttgagttccgacaagccaacattgaggcgtacggcctggagtccgac
tctctcgatgatggtatcctcaaagctgaatacggctacgatatgctaccacaattctgg
acatcgtcacacaacattgtcagctccctccgtagcttcatcgatgttggccgcaacctt
gcagtggagaattacgaagaaggctaccaagagcttcttgcacaaaagatcggcaaggat
aatccccgcctcgtcaagctgggatgccagacccatatcgaacgcttccagtgggctctc
gcgcagagtgacgagaagacacgagccatgggccgcagtctaaaggatgagtggaacaac
aatgtccggccgtcgcacattatgggtttgatggagattggactcgctacagaagggatg
aaactcgctgagcagtatcatgacatgtccacactcgtcaacctgatttgggaggagacg
acttggctcgagtctgaaaaagcaagcacacgcagcaagatggagcaggccgaaagcact
gtcaagctcaaccgaatcaaagagcgcattgcgcgatactttgaggtctatggcgatgac
tgggctgatgcattctactcaaagtacatccgacaaaaccaagccggccaactcttcaca
aaagagtatctcaaccagccggcactcacaaggtttttgcgagctgaaccgtcgcgggtg
cggcttgggtggatcaacgaagtgtggggtgagaagaactacgaggcggcagccgaagct
ctctacgaggcgggatcgaaacaggagacgaactcatggtgccagcgtgtggagctttcc
atggccaagcttgctttactttgcaagaaggaagcaaaacccggccatgagcagcaacta
ctggctgatgcgcgccgagagaagccaaaggcgctaaaagtacgcgaggccatgtttcag
agcattgaacagcagttggagtacaccaagatccaagaggaggtctacgagcggctgctg
ccaatcattacgggcgctctggacgaggactcggccgtcgatttgttgatggcagagttt
gggcaagggcgtctgagggaccgacctgcgcaccagtccatccttagacaaggcttggag
aatctcgtccgtcaccaggtcatcgatccggcacttatgattgacattcttactctgatg
aacgcagacgacagtgaggatggcatcactttgctgcaaggtgacgagttcatctacgct
ttcagggttctactggtcaactggaacaacatccaccgaacgacgcgtgacgggctcgtc
aagcttgtgtggaagcgcctcttgctcaaggatgactgggccaccatcaacaacaccaag
gagattaccgacgccaagatcaacgaaatgctgcaggacactgcgttagtatatacgttc
cgggaattgggtagactatgtgctggcaatagttttgcgagagtcgtcttgcccaagaac
ttgcaagagctccttggcgccggtggcacacacggggaactatgcgtccgctttgcggcc
gaagacctccgggagcccattatcaaggataacctcctcgacgacgatacgctccgcgaa
cacttggacaagaataggctagtccattggttctcggcggcgtaccaagcggccaaactg
gtcatgtctgaacagggcaaatcccagaatgggccggcgggcgctccgatgatggggaat
ggggtagcacctgagacaaggacggaagcggaggcggacctggaccgggaagcagctggt
tcggacacgtttgacggcgatgatgagagcgcactggatcacgacgacgttgagatgcgc
gacttgtaa
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