KEGG   Pyrenophora tritici-repentis: 6342772
Entry
6342772           CDS       T10215                                 
Symbol
PtrM4_114440
Name
(RefSeq) putative nucleoporin nsp1 protein
  KO
K14306  nuclear pore complex protein Nup62
Organism
ptrr  Pyrenophora tritici-repentis
Pathway
ptrr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ptrr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    6342772 (PtrM4_114440)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptrr03019]
    6342772 (PtrM4_114440)
Messenger RNA biogenesis [BR:ptrr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     6342772 (PtrM4_114440)
SSDB
Motif
Pfam: Nsp1_C NET2A hDGE_amylase DUF5798 Nucleoporin_FG BRE1 ATG17_like WXG100
Other DBs
NCBI-GeneID: 6342772
NCBI-ProteinID: XP_001934864
UniProt: B2W4I1
LinkDB
Position
6:531563..533562
AA seq 631 aa
MSFSFGNTNNNNSGGSAPNKNLFGAPASSSGGPTTLFGTTTNNTTSAPSSGGLFSSAGGG
TSNLFGAGVSSTPASKPGGLFGGGQATSGASSTPGMGFGGGFKKEGDASKPANTGLFSGA
GASTGGAATSSGPSFGFGTSAATPAVNKTSLLPSTTPAGPPPGGLFGQNNQAGSTSSLFN
TKPTTTTSSGPGLFGGATSGQTAAKPAFSLGGNQATSAAQDTSKPAGSLFSGIGSTTPSS
TPAKPSPFSLGATTTGQQASSQATSSAQPAMSLGGTSAPPASSAGGASSGFSFGTTAAST
AATTGATTTATSGAPTTTAPPALPAFPAPGGASSAPATSGATTSASTAPNVSSRPTGTEA
PASSSNTTTQPASTSGATSGTSGNNAAQAGLAASTAGPAPSAQSRLKNKSMDEIITRWAA
DLSKYQKEFQAQAETVASWDRALVENSDKVRQLYSKTFQAERDAAEVERQLTIVEDNQNE
LDSYLDRYEKEIDNLMKMHGVNSKNETLRGPDQERERTYKLAEKLQDRLNELNKDLTEMI
EEINNTSQTLSKTGKPDDPLTKVVRVLNTQLAQLQLIDSGASQLQQKIKEAQSETRSVGA
NGWNGLGSDPSADFMKSVRGGRASQRFGGVS
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgagcttctcattcggcaacaccaacaacaacaatagcggaggtagcgcgcctaataag
aatctttttggcgcacctgcctcaagtagcggtggaccgacgacgcttttcggcaccacg
acgaacaacacgaccagcgcacccagcagcggcggtctcttcagcagcgcgggtggaggc
acttctaatttgttcggcgccggcgtatcgagcacacctgcgagcaagccgggcggtcta
tttggcggaggccaagctacgtcgggcgcgtcgtcaacacctggtatgggatttggagga
ggattcaagaaagagggagatgcgtccaagccagcaaacacaggactgttcagtggagcg
ggtgcttctactggcggagcggcgacgtcttcgggaccctcgtttgggttcggtacatcc
gctgccacgcccgcagtaaacaagacgtcattactaccatccacgactccagccgggcca
cctcccggtggtctgttcggtcagaataatcaggccggaagtacatcctctttgttcaac
acgaagccaaccacaacaacttcctctggccctggtctttttggtggcgctacctctgga
caaactgctgcgaagcctgccttctctctaggcgggaaccaagcaacatccgctgcacag
gacacctctaaacccgcaggtagtctcttcagcggcatcggtagcacaactccctcttcc
acaccagcaaaaccttccccattcagcctcggcgctacaactacgggacagcaggcttcc
tcgcaggctacctcgagcgcgcaaccggctatgtctttgggtggaacctctgctcctcca
gcgtcctctgcaggaggagccagcagcgggttcagctttggcactactgctgctagcaca
gcggcgactactggagctaccaccacagcaacaagcggtgcgcccaccacaaccgcacct
cctgcccttccagcgttcccagccccgggtggtgcaagctcagcacctgccacctctgga
gctacaacctccgcaagcaccgctccaaatgtgtccagcaggcccaccggaaccgaagct
cctgcttcatcatcaaacacaaccacacagccagcatctacttctggagccactagcggt
acctcgggaaacaatgctgctcaagctggattagctgcctcgacagctgggccagcacca
tcagctcagtcacgactaaagaacaagtccatggacgaaatcattacccgctgggcagcc
gacttgtcaaagtaccagaaggaattccaagcacaagctgagacagtcgcttcgtgggac
cgagctttggtggaaaactcagacaaggttcgacagctgtactcaaagacctttcaggca
gagcgagatgctgcggaggtcgagagacaattgacgattgtggaggataatcagaacgag
cttgactcgtacctggaccgatatgagaaggaaattgacaacctcatgaagatgcacggt
gtcaacagtaagaacgaaactttgcgtggacccgatcaggagcgtgagaggacctacaag
cttgccgagaagcttcaagaccgcctcaacgagcttaacaaggacctcacggagatgatt
gaagaaatcaacaacacttcgcaaaccctcagcaagaccgggaagccagatgatccccta
accaaggtcgtccgcgttctcaacacacagctcgctcagctccagcttattgactctggc
gcttctcagcttcagcagaagatcaaagaggcacagagcgagacacgcagcgttggcgct
aacggctggaacggacttggttcggacccttcggccgactttatgaagagcgttcggggc
ggtcgtgcctcgcagcggttcggcggagtatcgtag

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