Pyrenophora tritici-repentis: 6342851
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Entry
6342851 CDS
T10215
Symbol
PtrM4_115240
Name
(RefSeq) RpoB, DNA-directed RNA polymerase, beta subunit- subunit
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03020
RNA polymerase
ptrr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
6342851 (PtrM4_115240)
09124 Replication and repair
03420 Nucleotide excision repair
6342851 (PtrM4_115240)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrr03021
]
6342851 (PtrM4_115240)
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6342851 (PtrM4_115240)
Enzymes [BR:
ptrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
6342851 (PtrM4_115240)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
6342851 (PtrM4_115240)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
6342851 (PtrM4_115240)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
6342851
NCBI-ProteinID:
XP_001934943
UniProt:
A0A2W1DJW7
B2W4R0
LinkDB
All DBs
Position
6:755470..759044
Genome browser
AA seq
1173 aa
AA seq
DB search
MKFGRVYLARPTHTEGDGTTVQLYPHEARLRNLTYSGAMLADIENRVMVAREGRDPDADD
DEEMEGGYTGGQNQIRWERENMSSDDGAAARVFIGKLPVMLRSELCHLRAQSDADLFALN
ECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKKQGPIPWIAEIRSAVEKGTRLISSF
NIKWAENSLAGPGKRIPGPFAYATLPYIKADVPMAIVFRALGIVSDEEILSHIVFDRNDT
QTLELLKPSIEEGSVVQDRETALDFIAKRGANSGTRDRRLKFARDIMQREFLPHISQKEG
QDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLIANLFRILFLKLTKDVY
KYLQRCVENNQDFNVQMAVKASTITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYA
STLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQACGLVKNLSLMCYVSVGS
DATPIVDFMTQRNMQLLEEYDQNQSPDATKVFVNGVWVGVHSNAQQLVTVVQELRRNGTL
SYEMSLIRDIRDREFKIFTDAGRVMRPLFVVENDVRKPNRNHLIFTKEISNKLKSEQMEA
NQRQGWSEEEVEQATYGWRGLIQDGVVEYLDAEEEETAMITFSPEDLEEWREMKMGLPMT
DHSLEGSQRLRRLKPLPDPRIHSYTHCEIHPAMILGICASIIPFPDHNQSPRNTYQSAMG
KQAMGVALTNFALRMETMMNVLYYPQKPLATTRSMEYLKFRELPAGQNAIVAIATYGGYN
QEDSVIMNQSSIDRGLFRSLFYRAYTEQEKRIGVNVLEQFEKPTRADTLRLKGGTYDKLD
DDGVVAPGVRVSGDDIIIGKTAPIATDAAELGQKTTLHTKRDVSTPLRSTENGIVDQVLF
TTNTEGLRFVKVRTRTTKVPQIGDKFASRHGQKGTIGITYRQEDMPFSREGLTPDLIINP
HAIPSRMTIAHLVECLLSKVGAITGQEGDATPFTDVTVDQVSQLLENAGYQKRGFEIMYN
GHTGKKMRTQIFLGPTYYQRLRHMVDDKIHARARGPLQILTRQPVEGRARDGGLRFGEME
RDCMIAHGAAAFLKERLFTVSDAYTVHVCDICGLMSPIANLKKNLYECRPCHNKTRISQI
HIPYAAKLLFQELLAMNIATRMFTDRSGLSVRD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcggacgcgtctaccttgcgcgcccgacgcacacggaaggcgatggcacaacg
gtgcaattatacccccacgaggcgcgtctgcgcaacctcacctactcgggcgccatgttg
gccgacattgagaaccgtgtcatggtcgcccgcgaaggacgtgacccggacgccgacgac
gatgaggaaatggagggtggatacacaggagggcagaaccaaattcggtgggagcgcgag
aacatgtcgtcggatgatggcgctgcggcccgtgtcttcatcggaaagctgcctgtgatg
ctgaggtccgagctctgccacctgcgagctcagtcggatgctgatctgttcgcgctcaac
gaatgtccctacgatcagggtggttactttgttatcaacggtagtgagaaggtgctgatc
gcccaggagcgcagcgcagcgaacattgtacaggtcttccgaaagaagcagggtcctatc
ccatggatagcggaaattcgaagtgcagtcgaaaagggcacccgcctgatttcctccttc
aacatcaagtgggctgagaactcgctcgctggccccggcaagcgtatacccggacccttc
gcatatgccaccctcccttacatcaaggcggatgtgccaatggccattgtcttccgtgcg
ctcggaatcgtttccgacgaggaaattctgagccacatcgtcttcgaccgtaacgacaca
caaaccctggagctgttgaagcccagtattgaggagggttcagtcgtgcaggacagggag
acggctctggacttcatcgccaagcgtggcgcgaactctggaaccagagacaggcgtttg
aaattcgcgagggatatcatgcagcgcgagttcttgcctcacatttcccaaaaggagggc
caggacacccgcaaagcctacttcttcggttacatgatccatcgactattgcagtgtgtg
ttgggtcgacgcgacgaagatgatcgtgatcacttcggaaagaagcgcctggatcttgcg
ggacccttgattgccaacttgttccgtattctgttcctcaagctcaccaaggatgtttac
aagtacctccagcgatgcgttgagaacaaccaggatttcaacgtccagatggccgtcaag
gcaagcaccatcacaaacggtctcaagtactcccttgccactggcaactggggtgaccag
aaaaaggctgcttcggccaaggctggtgtatcgcaagtgttgaaccgatacacatatgcg
tctacactctcccatcttcgtcgaacgaatacccccgtaggtcgtgacggcaaactggcc
aagccgcgacaacttcacaattcccattggggcctcgtctgccctgctgaaacccctgaa
ggacaggcttgtggtttggtcaagaacctgtcactgatgtgctacgtaagtgtcggtagc
gacgcaacacccattgtcgacttcatgacccagcgaaacatgcagcttctagaagagtat
gaccaaaaccagagtccagacgcgaccaaggtcttcgtcaacggagtatgggttggtgtt
cattccaacgctcaacagctcgtcactgttgtgcaggaactgcggcgaaacggtactctc
tcctacgagatgagtctgattcgtgacattcgtgatcgagagttcaagattttcacagac
gctggtcgtgtcatgagaccacttttcgtcgtcgagaacgacgtccggaagccaaaccgc
aaccatctcatcttcacaaaggagattagtaacaaactgaagtccgagcaaatggaggcc
aaccagcgacagggctggagtgaggaggaagtcgaacaggccacctacggttggagaggg
cttatccaagatggtgtcgtcgagtaccttgacgccgaagaagaagagactgccatgata
acgttctccccagaagacttggaagagtggcgagaaatgaagatgggcctgcctatgacc
gaccactctctggaaggcagccagcgtcttcgccgtctcaagcccctgcctgatcctcgt
atccattcttacacgcattgcgagatccacccggccatgattctgggtatttgcgccagt
attattcctttcccggatcacaaccaatcgcctcgtaacacataccaatctgccatgggt
aaacaagccatgggtgtggctcttaccaactttgcgctgcgcatggagacgatgatgaac
gttctctactaccctcagaagccgttggccacaacccggtccatggagtacctcaagttc
cgtgaactgcctgctggacaaaacgccattgtcgccattgctacctatggtggatacaac
caagaagattccgtcatcatgaaccagagcagtatcgatcgaggtctcttcaggagtctg
ttctaccgtgcatacacggagcaagagaagcgcattggtgtcaacgttctagagcagttt
gagaagcctacgcgtgccgatactctacgtctgaagggtggcacatacgacaagctcgac
gacgacggtgtcgttgctcctggtgtgcgtgtttctggtgatgatatcatcattggaaag
acagcgcccattgcaactgacgcagcggagcttggacagaagactactcttcacaccaag
cgcgatgtgtcgacaccacttcgtagcaccgaaaacggtatcgtcgatcaggtactcttc
actaccaataccgaaggtctgcgattcgtcaaggtccgtacaaggacaaccaaggtgccg
cagattggtgacaagtttgcgtctcgtcacggtcaaaagggtactatcggtatcacttat
cgacaagaggacatgcctttctccagggagggtctgacgccagatttgattatcaaccct
cacgccattccatcccgtatgacaattgcccatttggtcgaatgtttgctttccaaggtt
ggcgccatcacaggacaagagggtgacgccacaccctttaccgatgtcactgtagatcag
gtatctcaactactcgagaatgctggttaccaaaagcgtggttttgagatcatgtacaac
ggccatacgggtaagaagatgcgaactcaaatcttcttgggccccacatattaccagcgt
ctgaggcatatggtcgacgacaagatccacgctcgtgctcgtggaccattacaaattctg
acgcgccagcctgtggagggtcgtgctagggatggtggtctccgtttcggagagatggaa
cgtgattgtatgattgctcacggtgctgctgctttcttgaaggagcgcctcttcacggtc
tcggatgcgtacacggtgcatgtgtgcgacatttgtggcctgatgagccctattgcgaat
ctgaagaagaacctttacgaatgccgtccctgccacaacaagacgcgcatctcgcaaatc
cacattccctacgcggccaagttgctcttccaggagcttctcgccatgaacattgccaca
cgcatgtttacggaccggtctggactcagcgtgcgcgactag
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