Pyrenophora tritici-repentis: 6343260
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Entry
6343260 CDS
T10215
Symbol
PtrM4_120220
Name
(RefSeq) RING-finger-containing ubiquitin ligase
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptrr04131
]
6343260 (PtrM4_120220)
04121 Ubiquitin system [BR:
ptrr04121
]
6343260 (PtrM4_120220)
Enzymes [BR:
ptrr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
6343260 (PtrM4_120220)
Membrane trafficking [BR:
ptrr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
6343260 (PtrM4_120220)
Ubiquitin system [BR:
ptrr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
6343260 (PtrM4_120220)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
Zn_ribbon_19
zf-rbx1
zf-RING_UBOX
zf-RING_5
HypA
zf-RING-like
zf-UDP
zf-ANAPC11
DUF1272
DUF7117
DZR
Baculo_RING
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
6343260
NCBI-ProteinID:
XP_001935349
UniProt:
B2W3G6
LinkDB
All DBs
Position
6:2084739..2086237
Genome browser
AA seq
453 aa
AA seq
DB search
MDQSSNQDAPSQNQRSGHRDMMFCHECNDEWYRDEHGLSCPECGSDFTEIIEDNNDPRDT
TMFGHDGDDTNSLPDLEDALPHLHQHNPWQNDDPEEGDISNIHFTQTAPGRYNLQATVTR
SVSPQGGLAPGSIGGFMAMLNGLTGAALRPQGQAGQTEGPFSRSPPGTGENPNQTAFQEA
QNQGAQGGPQIHGGRFTYRGGARIFPRDGNAAGRAEPVDEMTNIVTGLMAAFGAPPGHIH
VYPHPQGGAQGMFGGEHNHVPGEQFAGNPILQLFSTMGIMGPAGNNLGDFVYSQEGLDRI
VSQLMEQTATSNAPGPATQNDIDALPRKEVTEDMLGDEHKAECSICMDEVNIGEQVTLLP
CKHWFHHPCISAWLREHDTCPHCRKGITKGGEGQSNNPASAEPQADRTSHMPGSFNPDSP
PDNQGNSSGNANAESGNDGISDRIRRGLFGSPQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtcgagtaatcaggatgcgccgtcgcagaaccagcggtcaggtcaccgcgac
atgatgttttgccacgaatgcaacgacgagtggtatcgggacgaacatggcctctcgtgt
ccagaatgcggctcagacttcacagagatcatagaagataacaacgacccgagagacacg
accatgtttggtcacgacggcgacgacaccaactctctacctgatctcgaggacgcgcta
ccccacctacatcagcacaacccatggcaaaacgatgaccctgaggagggagatattagt
aatatccactttacccagacggcgcccggaaggtacaacctacaggccaccgttacccgc
tctgtatctccccagggtggccttgcgccgggatcaataggcggcttcatggctatgttg
aacgggttgactggagcggcattacgaccccaaggtcaagcaggtcagaccgaggggccg
ttttcgaggtcgcctcctggtactggagagaaccccaaccaaaccgcatttcaagaagcc
caaaatcaaggcgcacaaggaggaccccagattcacggaggaagattcacgtatcgtggt
ggcgctaggatctttcctagggatggaaacgctgctggacgggccgagcctgtggacgag
atgacaaacatcgtgacaggtctaatggcagcgttcggtgcgccacctggtcacattcat
gtctacccccacccccagggcggtgctcagggcatgtttggtggcgaacacaaccacgtc
cctggcgaacaatttgctggtaaccccatcttacaactattctcgactatgggcatcatg
ggccctgctggcaacaacttgggcgactttgtctactcacaggagggtctcgaccgcatc
gtttcccagctcatggaacaaacggcgaccagcaacgcaccgggaccggcgactcaaaac
gacatcgatgcccttccccgtaaagaagtcaccgaggacatgctaggcgatgagcacaag
gctgaatgcagtatatgcatggatgaggtcaacatcggcgagcaagtcacgctactgccc
tgcaagcactggttccatcacccgtgcatctcggcatggctacgcgagcacgatacctgc
ccgcattgtcgaaagggcatcaccaagggtggcgagggccagtcaaacaaccctgcgtca
gccgaaccacaggcggatcggacgtcccacatgcctggctcgtttaacccagattcaccg
cctgacaatcaaggcaattcgtctggtaacgcgaacgcagagtcgggtaatgatggcatc
agcgatcggatacgcaggggtctgtttggttccccgcaatag
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