Pyrenophora tritici-repentis: 6343356
Help
Entry
6343356 CDS
T10215
Symbol
PtrM4_121430
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
6343356 (PtrM4_121430)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrr03021
]
6343356 (PtrM4_121430)
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6343356 (PtrM4_121430)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
6343356 (PtrM4_121430)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
6343356 (PtrM4_121430)
PBAF complex
6343356 (PtrM4_121430)
GBAF(ncBAF) complex
6343356 (PtrM4_121430)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SANT_DAMP1_like
SWIRM-assoc_1
Motif
Other DBs
NCBI-GeneID:
6343356
NCBI-ProteinID:
XP_065961655
UniProt:
A0A834RT99
LinkDB
All DBs
Position
6:complement(2407504..2409828)
Genome browser
AA seq
678 aa
AA seq
DB search
MVQTQTHWIKITPPSTMSAAHSEWLQSGYFDGQDKLSTLEDMMGIFAAPNDELLRHMADP
NFLEDALKESSNEATATPANAPDNPPDAPDGPGPETEDADGQEDEEMGGVDDTKKENGEG
ADAMDPEAQAKADLQSAARSHFVTQTYATIIPSYATWFDMRYIDYREHKALPEFFNGRNR
SKTPAVYRDYRDFMINTYRLNPSEYLTVTACRRNLAGDVCAIMRVHAFLEQWGLINYQVD
PQERPSNIGPPFTGHFRVTVDTPRGLQPFQPGPGSKVTEGKQLAATDRAASQQPTAKSET
KSLAGRNIYEANGKEASAEPKAANGEANGASVHVKNLEAAAKEPIKVINCFSCGVECTRV
HFHETKPSEQPGQLKQGGGLKRDLCPRCFVEGNFPSGTSSVDFTKISNPESSATAENEEK
WTEEETLLLLEGLEEFDDDWNRVADHVQTKTREQCVMKFLQLEIEDKYIEADLTESQSAA
PSTKFLRDLEYLSEGRVPIHHADNPILSVVSFLAGLAPANVTEAAVASGRSVGEMKRILQ
DKINKAPTAPSEKGKEKEGEQSTPAATASDVKPEGGDAMDIDTSTERRRQQLFMDRLNFQ
RRVRALEDATKRISGSIGGQGLPGSLSAEEAVHALEEAMRFFGVGKGEDSMGVKRDSVDA
GVTQPVSEGAEGYSKVEI
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagacgcaaacgcactggatcaagataacaccaccatcgaccatgtctgccgcc
cactccgagtggctgcaaagcggctactttgacggccaagataaactttctacattggaa
gacatgatgggtatatttgcggcgccaaatgacgagttactaaggcacatggcagacccg
aacttcctcgaagacgccctcaaggagtcatcaaacgaagccactgccacacctgcaaat
gcaccagacaacccgccagacgcacccgacggtccgggaccggagacggaggatgcagat
ggccaagaagacgaggagatgggcggtgtagatgataccaagaaagagaatggcgaaggc
gccgatgccatggacccagaggcacaggcaaaggccgacctgcaatcagccgcacgctcc
catttcgttactcagacctatgcgaccatcattccgagctatgcgacctggttcgacatg
cgatacatcgactaccgcgaacacaaggccctacccgagttcttcaacggccgcaatcgc
agcaagacgccagctgtgtaccgagactaccgcgatttcatgatcaatacctaccgcctt
aacccttcagagtatcttacagtaaccgcatgccgaaggaatctcgcgggagacgtgtgc
gccatcatgcgcgtacacgcctttctcgaacagtggggtctgattaactatcaggtggat
ccccaagaacggccatcaaacattggtcctccattcaccggccacttccgtgtcacagtc
gatactccccgcggactgcaacctttccagccaggaccaggctcgaaagtgacagaaggc
aagcaacttgcagccaccgatcgcgccgctagccagcaaccgactgcaaagagtgagacc
aagtctttagctggacgcaacatctacgaagccaatggcaaagaagcatctgcagagcca
aaggcagccaacggagaagcaaacggtgcatcagtccatgtcaagaaccttgaggctgct
gcaaaggagccaatcaaggtcatcaactgcttcagctgtggcgtcgaatgcactcgcgta
cacttccacgagacgaagccgtctgagcaaccgggtcaattgaagcaaggaggtggtctc
aagcgggatctttgcccaaggtgctttgtcgagggcaacttcccttcaggcacctcttcg
gtagactttaccaagatctcgaacccagagagctcagccactgctgagaacgaagagaag
tggacggaagaggagactcttctgctgctcgaaggcttggaggagtttgatgatgactgg
aaccgcgtcgcagaccacgtacaaaccaagacgcgcgagcagtgtgtgatgaagtttctc
cagcttgagattgaggataagtacatcgaagcagatctcaccgaatcccaatcggcagct
ccatcaacaaagttcctccgcgatctcgagtatctcagcgaaggtcgcgtacccatccac
catgcagacaaccccattctcagtgtagtcagcttcttggctggccttgcgcctgcaaac
gtaactgaagccgccgtggcatcagggcgcagcgtgggtgagatgaagcgcatactccaa
gataagatcaacaaagccccaaccgcaccatcagagaagggcaaggaaaaggaaggcgag
caatctacacctgcagccactgcctcagacgtgaagcccgaaggcggagacgccatggac
atcgacacctcaaccgaacgtcgccgccagcaactcttcatggatcgcctcaacttccag
cgccgcgttcgcgctctcgaagacgcaacgaagcgcatctccggctccattggcggtcag
ggtctacctggtagcttgagtgccgaggaggcagtacatgcgctggaggaggctatgcga
ttctttggcgtgggcaagggcgaggatagtatgggggtcaagagggatagtgttgatgcc
ggtgttacgcagccagtcagtgaaggcgcggagggatacagtaaggtcgagatttag
DBGET
integrated database retrieval system
