Pyrenophora tritici-repentis: 6343557
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Entry
6343557 CDS
T10215
Symbol
PtrM4_111710
Name
(RefSeq) TIP49, DNA helicase TIP49, TBP-interacting protein
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
6343557 (PtrM4_111710)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6343557 (PtrM4_111710)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptrr03037
]
6343557 (PtrM4_111710)
Enzymes [BR:
ptrr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
6343557 (PtrM4_111710)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
6343557 (PtrM4_111710)
Chromatin remodeling factors
SRCAP complex
6343557 (PtrM4_111710)
INO80 complex
6343557 (PtrM4_111710)
INO80 complex (yeast)
6343557 (PtrM4_111710)
SWR1 complex
6343557 (PtrM4_111710)
ASTRA complex
6343557 (PtrM4_111710)
Cilium and associated proteins [BR:
ptrr03037
]
Motile cilia and associated proteins
Dynein assembly factors
6343557 (PtrM4_111710)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
AAA_19
AAA_28
AAA_5
Zeta_toxin
Cdc6_lid
Mg_chelatase
DnaB_C
ATPase
bpMoxR
AAA_25
IstB_IS21
AAA_18
SLFN-g3_helicase
AAA_7
nSTAND3
AAA_17
Motif
Other DBs
NCBI-GeneID:
6343557
NCBI-ProteinID:
XP_001935640
UniProt:
B2W669
LinkDB
All DBs
Position
5:complement(3101106..3102645)
Genome browser
AA seq
462 aa
AA seq
DB search
MTTVPVSDVKSSQDRSSRTAAHSHIKGLGLSSDGRATPSAGGFVGQAAAREACGLVVDLV
KAKKMSGRAVLLAGGPGTGKTALALAVSQELGTKVPFCPIVGSEIYSAEVKKTEALMENF
RRAIGLRVKETKEVYEGEVTELTPEEAENPLGGYGRTISHLLITLKSAKGTKKLRLDPSI
YEAIQKERVRLGDVIYIEANTGAVKRVGRSDAYATEFDLEAEEYVPIPKGDVHKKKEIVQ
DVTLHDLDVANARPQGGQDIMSMMGQLMKPKKTEITEKLRLEINKVVNRYIDQGIADLVP
GVLFIDEVHMLDLEAFTFLNRALESPLSPLVILASNRGNTHIRGGTNLPPSAHGIPTDLL
ARLLIIPTHPYGPAEIKSIITTRVTTEKLHISPAAKDKVSALGEKISLRYALQLLAPASV
LAEVNGRENKQIEVDDVEECQNLFLDARRSAQALGETDGYIS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgactacggtgccggtcagcgacgtaaagagctcgcaagaccgctcgtcccgaaccgcg
gcgcattcccacatcaaaggcttgggtctgtcgagtgatggacgcgccactccctcagca
ggtggctttgttggccaagctgcagctcgagaggcatgcggtctagtcgtcgacctcgtc
aaagcgaagaagatgtcaggccgagctgtattgctcgcaggaggaccgggaacaggaaaa
accgcattggcattggccgtgagccaggagttgggcacaaaggtgccgttttgcccgatt
gtgggaagtgagatttactctgcagaggtcaagaagactgaagcactcatggagaacttt
cgaagagctattggcctacgcgtcaaggaaacaaaggaggtctacgaaggcgaggtgaca
gagctcacgcctgaagaggctgaaaacccgcttggaggctatggccgcacgatttcccac
ctcctcatcacgctcaaatctgcaaagggcacaaagaagctgcgcctcgacccgtccata
tacgaggctatccaaaaggaacgcgtccgcctgggcgatgtcatctacattgaagccaac
acgggcgccgtcaagcgcgtcggccgatcagacgcatacgcaaccgagttcgacctcgaa
gctgaggagtatgtgcccataccaaagggcgacgtgcacaagaagaaggagattgtccaa
gacgttacgctgcacgacttggatgttgcgaatgcgcgaccccagggcggtcaagatatc
atgagcatgatgggccagctgatgaagcccaagaagactgagatcacggagaaactacgg
ttggaaatcaacaaggtggttaataggtatatcgaccaaggaatcgccgacctagtccct
ggtgtgctgtttattgatgaggtgcacatgctcgaccttgaagcctttacattcctgaac
cgcgctcttgaatcgcctctttcgccccttgtcatcctcgcctcgaatcgcggcaacacg
cacattcgcggcggcaccaaccttcctccctctgcacacggcatcccgacagatttgctc
gcgcgcctcctcatcattccaacccacccatacggtcctgcagaaatcaaatccatcatc
accacgcgcgtcacgacggaaaaactccacatttcccctgcagccaaagacaaggttagc
gcgctgggagagaagatcagtctgcgctatgcgctacagttgctagcacctgccagtgtc
ttggctgaggtcaacggacgcgagaataagcaaatcgaagtcgatgatgtagaggagtgt
cagaacttgttcttggatgcgcggaggagtgcacaggcgcttggagagacggacggttac
atttcgtaa
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