Pyrenophora tritici-repentis: 6343672
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Entry
6343672 CDS
T10215
Symbol
PtrM4_110540
Name
(RefSeq) Tymo-45kd-70kd multi-domain protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
6343672 (PtrM4_110540)
Enzymes [BR:
ptrr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
6343672 (PtrM4_110540)
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Gene cluster
GFIT
Motif
Pfam:
fn3_3
CBM-like
Motif
Other DBs
NCBI-GeneID:
6343672
NCBI-ProteinID:
XP_001935753
UniProt:
B2W6I2
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All DBs
Position
5:2800184..2802292
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AA seq
671 aa
AA seq
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MRRLALTTTTALLLLLESTSAFLQASQNATSLTLSNDRLVASVSKSRGYISVLTLDGQNL
LGSESGDNTGIGPYLDCYCTPAGFWTPGRGKNVQYQLFNGTDSTSTPYGGISMGETYALT
GQRLEQYWFLREGETGLHTFSRLVYDNKTTPFLRNLQEFRTLFRPNHDPPLFTHFVANEQ
FAAPRPDTTGQVVVQDATWKLANDQDAYVKGVGEYFTKYTFQDTWRNHRAHGMWADGSGS
KNGTTYGAWLVHNTVETYFNGPVHSDLVVDGIVYNYMVSNHHGDQTPNITDGFDRTFGPQ
YFHFNAGGSLEELRDDASQYGLQPDWNAAFYDSIAHHVPNLVPTSQRGTFNATIRLPSGA
ENAIAILTASGHDFQDNVFDPTAYQYWTEIPLVTNTTSQHITIPRVKAGSYRLTIYATSI
FGDYTHDNITITPGATTSLSNLTWAPDSAGKELFRIGTPDKSSGEYLHGTTASPTHPLLT
EEYRLYWAAYDYITDFPNGVTYRVGHDDVSTALNYVHWAVYGGKANSERPVSVPEHQYNW
TILFEVSEEEVRGKDTATFTVQLAGAKTAAGNTDVFNATERWADLPLGVAVNGVDLVPWV
IPHYQSSSCAVRSAVICYNLAHKFTFDASILKSGEENSIILSLPYNGTNYESALLPESVY
VQYDAMRLEVE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcctcgctctaacaacaaccacggcgctcttgctgttgttggagagcacaagc
gccttcctccaagccagccaaaatgccacaagtctaacactttctaacgaccgcctcgta
gcttccgtgagtaaaagtcggggatacatcagcgttctcacgctcgatggccagaatttg
ctaggttcagaatctggagataatacgggtataggtccatacctggattgctactgtaca
ccagccggcttctggacacctggacgaggaaaaaacgtccaataccagctcttcaatggc
acagactccacaagcacaccctacggtggcatcagcatgggcgagacgtatgcgcttacg
ggacaaaggttggaacagtactggtttctacgggaaggagagactggactacacacgttt
agtcggttggtttacgacaataagacaaccccttttctgcgtaatctacaggaatttcga
actttgttcagaccgaatcatgatccaccgctcttcacgcactttgttgcaaacgagcag
tttgcggcgccgaggccggatacaacgggccaagttgtcgtgcaagacgcaacgtggaag
ctggcgaatgatcaggatgcgtatgtaaaaggggtaggggagtactttacaaagtacacg
ttccaggatacttggcgtaaccaccgcgctcacggcatgtgggctgatggcagtgggagc
aagaacggtactacgtatggcgcctggctcgtccacaacacagtcgaaacgtactttaac
ggtcccgtacattcggatctcgtcgtcgatggtatcgtgtacaactacatggtcagcaac
caccacggcgaccaaacaccaaatataaccgacgggtttgaccgtacctttgggccccaa
tacttccacttcaacgccggtggttcactggaagaactcagagatgatgcctcacagtac
ggtctccagcctgactggaacgccgccttctacgattcaatcgcacaccacgtacctaat
ctcgttcctacttcgcaacgtggcactttcaacgcaaccatccgcctcccctctggcgct
gaaaacgcaatcgccatcctaacagccagcggccacgacttccaagacaacgtcttcgac
cccaccgcctaccaatactggaccgagatccctcttgttacaaacaccacctctcaacac
atcaccatcccccgtgtaaaggcaggaagctaccgcctaaccatctatgccacttccatc
ttcggcgactacacccacgacaacatcaccatcacgcccggcgccacaacctccctctcc
aacctaacatgggcccccgactcagcgggtaaagaactcttccgcatcggcactccagat
aaatcctcgggcgaatacctccacggcaccacagcctcacccacacacccgttgctaaca
gaagaataccgtctatactgggcggcctacgactacatcactgatttcccaaacggtgta
acgtatcgcgtaggccacgatgatgtttccacggcgctgaattacgtccattgggctgtg
tatggtgggaaagcgaattcagagcggccggtgtcagtgccagagcaccagtataattgg
acgatattgtttgaggtgagtgaggaggaggtgcgagggaaggacacggcgacttttacg
gtgcagctggcaggggcgaagacggcggcgggtaatacggatgtttttaatgcgacggag
aggtgggcggatttgccgttgggcgtggcggttaatggggtggatttagtgccgtgggtt
attccgcactatcaatcatcctcttgtgccgtgcgctcggctgtgatatgttacaatctg
gctcacaaattcacctttgacgcatctatactcaaatcaggggaggaaaacagcatcatc
cttagtctgccgtacaacgggacaaactatgaaagtgcgctgctgccagagtcggtgtat
gtgcagtatgatgcgatgagattggaggtcgagtag
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