Pyrenophora tritici-repentis: 6343811
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Entry
6343811 CDS
T10215
Symbol
PtrM4_109000
Name
(RefSeq) DcpS-C multi-domain protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
6343811 (PtrM4_109000)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6343811 (PtrM4_109000)
Enzymes [BR:
ptrr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
6343811 (PtrM4_109000)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
6343811 (PtrM4_109000)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
6343811 (PtrM4_109000)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
6343811 (PtrM4_109000)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
6343811 (PtrM4_109000)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
Motif
Other DBs
NCBI-GeneID:
6343811
NCBI-ProteinID:
XP_001935891
UniProt:
A0A2W1HZQ4
B2W6X0
LinkDB
All DBs
Position
5:complement(<2393344..>2394387)
Genome browser
AA seq
308 aa
AA seq
DB search
MSTRNHKHAQAEQTHDTMTAEEIAGTEPPNQARPGVDPASQKRPNAFTELLSRSKKRKSH
ITADDSPGLKRKTAKTFKSIDPRDGLIVYIEKPEANPEGRVVEYDDDFVVINDKYPKAIV
HLLFLPRKPAYYNQHPLSALSTDPAFLAQVRTRAERLKLLAASELRRQYGDTSISDHPYQ
SALEEMMSAPEPPSPEEQTARLPPGRDWTKDIVIGVHTHPSMNHLHIHIFSRDMQSPWMK
HKKHYLSFNSSFLVKLDEFPLEESSPRYHPSSWTSWDMKCWRCGENYKNKFAALKKHLDE
EFEEWKKE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctacacgcaaccacaaacatgctcaggctgagcaaactcacgatacaatgactgca
gaagagatagcgggaacggagccgccaaaccaggctcgacccggcgtagatccagcttcg
cagaaaagaccaaacgcattcacagaactcttgtcgcgatctaagaaacgaaagtctcac
ataaccgccgacgactcaccaggccttaaaaggaagactgcgaaaacttttaagagcatt
gatccacgcgatggcctcattgtttacatcgagaagccagaggcaaatcccgagggaaga
gtagtagaatacgacgacgactttgtcgtgatcaacgacaagtacccaaaggcaatcgta
catctcctattcctgccacgcaaacccgcctactacaaccaacatcccctttctgccctc
tccacagaccccgccttcctcgcccaagtacgcacccgcgccgagcgcctcaaacttctc
gctgcctcggaactacgacgtcagtacggcgacaccagcatctccgaccatccctaccaa
tccgccctcgaagaaatgatgtccgcacccgagccaccatccccagaagaacaaaccgca
cgcttaccacccggtcgagactggacaaaagacatcgttatcggtgtacatactcatcct
tcgatgaaccatcttcacattcacatctttagtagggacatgcagtcgccgtggatgaag
cataagaaacattatcttagttttaactcgagtttcctagtgaaattggatgagttcccg
cttgaagagagcagtccgagatatcatccgagtagctggacgagctgggatatgaagtgc
tggcggtgtggggagaattacaagaataagtttgcggcgctgaaaaaacatcttgatgaa
gagtttgaggagtggaagaaggagtag
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