Pyrenophora tritici-repentis: 6343966
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Entry
6343966 CDS
T10215
Symbol
PtrM4_107390
Name
(RefSeq) MUS81, ERCC4-type nuclease
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03420
Nucleotide excision repair
ptrr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
6343966 (PtrM4_107390)
03460 Fanconi anemia pathway
6343966 (PtrM4_107390)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrr03032
]
6343966 (PtrM4_107390)
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6343966 (PtrM4_107390)
DNA replication proteins [BR:
ptrr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
6343966 (PtrM4_107390)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
6343966 (PtrM4_107390)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
RESC10
Motif
Other DBs
NCBI-GeneID:
6343966
NCBI-ProteinID:
XP_001936045
UniProt:
B2W7C4
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All DBs
Position
5:<1983943..>1986838
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AA seq
948 aa
AA seq
DB search
MPGDAQAPVKLSLPLEFQQDIFNQLREEDELVILARGLGLLRLVTNLLHSYDAAGNNLIL
LVGADDRENVWVGEALAEHAAVSNAPKCRGLSLVNTDLMSVGTREKLYAQGGIFSITSRI
LIVDFLSGLLNPETVTGIVVLHAERVVATSLEAFILRIYRQKNKTGFLKAFSDTPEPFTT
GFSPLTNMMKNLFLTKPALYPRFHVAVANSLEGRKKAEVIELEVPMTDAMQDIQNAVLSC
VEASIGELKKANPGLEVEDWTVDSALHKNFDQIIRRQLDPVWHRTTFKTRQVVRDLSLLR
TILHALLTYDAVNFNKYLDTVLAASQPPPGSTKQNQSPWLFLDAADTIFTTAKRRVYTGK
VSNAELANASNAVPESLQPVLEEFPKWAQLAEILQEIEQDAYFNPTPQDSSNGSILIMCG
DQGTASQLREYLQTMYVKPEGIADEDEEEYEPSGKFMMRRKLRNYLTWKRDFSKVSAALF
SENQKAINTSTDKNAQSGMRQTSGRPPPNKRRRVRGGGNAAAGPARSDTGAVRTAGDRDA
HIASLMAELEPTEIEAAQKPGEVGFDPLDNMESYYELFDMNSLIVVHPYSGDLDEHILDE
TKPRYVVMYEPDAAFIRRIEVYRSSHTDRTVKVFFMYYGGSVEEQRYLSAVRREKDAFTR
LIKERANMALTMNSAANLAPEESFLRTINTRIAGGGRLAATAEPPRVVVDVREFRSSLPS
LLHGRSMVIVPCMLTVGDYVVTPHICIERKSIRDLIQSFANGRLFNQVESMMEHYKHPML
LIEFDQNKSFTLEPFTDFSAPSGGGASASGLASSPDLQAKLVMLTLAFPRLRIIWSSSPY
QTAEIFSELKKQQDEPDPLKAVQIGLDPNQSGDEMRSFNQTSQDMLCALPGINEKAVTTL
MLKSESIQEVANMEEREVCWLVGTDIGRRVHRFFNRSVYEEVPLQKFS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgatgcgcaagcccctgtgaagctctcattgcccctcgaattccagcaggac
atcttcaaccagctgcgcgaggaagatgagctggtcatcctcgctcggggcctcggcctt
ttgcgactagtcacaaatcttctccattcgtacgatgccgctggaaacaacctcatacta
cttgtcggggccgacgaccgcgaaaatgtgtgggttggcgaggcattggcagagcatgcg
gctgtcagtaatgcgcccaagtgtcgcggcctaagcctggtcaacacggatctgatgagc
gtcggcacacgagagaagctttacgcgcaaggaggaatattcagcataacttcgcgcatt
ctgattgtcgactttctgtctggcctcttgaatccggagacggtgacgggcattgtagtg
ctgcatgctgaaagagtcgttgccacgtcgctagaagccttcatcctgaggatctaccgg
cagaagaacaagactggcttcctaaaggctttctctgacacaccggagccctttacaact
ggcttctctcccctcacgaacatgatgaagaatttattcctgacaaaaccggcgctttac
ccgagattccacgtcgcagtcgccaattcgctcgagggacgcaagaaagcagaggtaatc
gagctagaagtgcctatgacagacgctatgcaggatatacagaatgcagtcttatcttgt
gtcgaagccagtattggcgagctcaagaaggccaacccaggcttggaagtcgaggactgg
accgtggacagtgccctacacaagaactttgatcaaatcatccgacgacagttggatcct
gtctggcaccgaaccacgttcaaaacacgacaggttgttcgggacttgtcactgcttcgg
actattctgcatgcgctcctcacatatgatgccgtaaacttcaacaagtaccttgacacc
gttttggcagcctcgcaaccaccgccagggtcgacaaagcagaaccagtcgccgtggctg
ttcctagatgcagcggacacaatttttaccacagccaagcggagagtatacacgggcaag
gtgtccaatgccgaattagccaatgcttccaacgctgtaccggagtccctacagcctgtt
cttgaagaattccccaaatgggctcagttggcagagatattacaggagattgagcaggac
gcatatttcaatccaacgccacaagactcttccaatggctccatactgatcatgtgtggt
gatcagggcacagcgtcgcaattgagagagtatctgcagaccatgtacgtcaagccagag
ggaattgccgatgaggatgaagaagagtacgagccatcggggaaatttatgatgcgacgc
aagctgcgtaactatttgacttggaaacgggatttcagcaaagtcagcgctgccctattc
tcggaaaaccaaaaagccatcaatacgagcacggacaagaatgctcagagtggcatgcgt
caaacctctggtagacctccacccaacaagcggcgtcgagtaagaggaggcggtaacgca
gccgcgggtcctgctcgctcagatacaggagctgtccgtacagcaggagatcgagacgcc
catatcgcaagcctcatggccgaactagagcccactgagatcgaagcagcacaaaagcct
ggcgaagtaggtttcgatcctcttgacaacatggagagctactacgagctcttcgacatg
aattctttgatcgtcgtgcatccctactccggtgacctagacgagcacattctcgacgaa
acgaagccccgatatgtcgtcatgtatgaaccggacgccgcgttcattcggcgcatagaa
gtctatcgatcctcacatacagaccggacagttaaagtcttcttcatgtactacggtggc
agtgtcgaagagcagcgctatctctccgctgtgcgccgtgaaaaagatgcctttactcgc
ttgattaaagagcgtgcaaacatggccttgaccatgaattctgctgctaacctcgccccc
gaggaatctttccttcggaccatcaataccaggatagcgggaggaggtcgtcttgcggca
actgcggaaccacctcgtgtagtagttgacgtacgagaatttcgatcctcgttaccatct
ctactgcatggaagatcaatggtcatcgtaccttgtatgttaaccgtgggcgactacgta
gtaacacctcatatttgcattgagcgaaagtcgatccgcgatctcatccaatcctttgcc
aacgggcggttgttcaatcaagtagaatcgatgatggaacactacaagcaccctatgctg
ctcattgagtttgaccagaacaaatccttcacgctggaaccgttcaccgatttttctgcc
ccgagcggtggtggtgcgagtgcgagtgggttggcttcttcaccagatctccaggcgaag
ctggtcatgcttactttggcgtttcctcgcttgagaataatttggagcagcagcccatat
cagacggcagagatcttctctgagctcaagaaacagcaggacgaaccggacccactcaag
gcagtgcagattggtctcgatccgaatcaaagtggagatgagatgcggagttttaatcag
acgagccaagatatgttgtgtgcgctgcctggaataaatgagaaagctgtcacgacgcta
atgctcaagagcgagtcaatccaggaggttgcaaacatggaagaaagggaagtttgttgg
ttggtcggaactgatatagggagaagagtgcatcgcttcttcaacaggagtgtgtatgaa
gaggtgccgttgcagaaattctcctag
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