KEGG   Pyrenophora tritici-repentis: 6344007
Entry
6344007           CDS       T10215                                 
Symbol
PtrM4_106800
Name
(RefSeq) hypothetical protein
  KO
K11093  U1 small nuclear ribonucleoprotein 70kDa
Organism
ptrr  Pyrenophora tritici-repentis
Pathway
ptrr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptrr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6344007 (PtrM4_106800)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptrr03041]
    6344007 (PtrM4_106800)
Spliceosome [BR:ptrr03041]
 Complex A
  U1 snRNP components
   U1 snRNP specific factors
    6344007 (PtrM4_106800)
 Complex B
    6344007 (PtrM4_106800)
SSDB
Motif
Pfam: U1snRNP70_N RRM_1 RRM_7 RRM_8 TRIP4_3rd
Other DBs
NCBI-GeneID: 6344007
NCBI-ProteinID: XP_065962166
UniProt: A0A834RVG2
LinkDB
Position
5:1810310..1811816
AA seq 319 aa
MTHLLPPMLLNLFAPRPPLRWVEPADHAPEKRCTPKIGGIGQYMDALREYKDNDGYVPTD
SWLQKRDRKKLEKKEKQEKLITEGVKDYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER
EFGRYGPIERIRIVEDVTQPADAPLKKRKRGYAFIVFEREKDMKAAYKETDGIKIKDRRV
LVDVERGRTVSGWRPRRFGGGLGGRGYTKGPSARGPAAPGGFGAAPAGPGGFGGRGGFQS
GGFGGRGGGGGGGGGGFRGGFGAVAVEVSATNQAATVDPQMVHLPDLEAREAEVSVAIVE
EGKKRTFNPLLGLLHSGSV
NT seq 960 nt   +upstreamnt  +downstreamnt
atgacgcatttactcccgcccatgctgttgaacctgttcgccccgcgtccgccgctgcga
tgggttgaaccagccgaccacgcgcccgagaagcggtgcacgcccaagattggcggcatc
ggacagtacatggacgctctgcgcgagtacaaggacaacgatggctatgtgccgaccgac
agttggctgcagaagcgcgatcgcaagaagctggagaagaaggagaaacaggagaagttg
attaccgaaggtgtcaaagactataaaccgtctgaggatccaaaggttcagggcgacgcc
ttcaagactctattcgtatcgcgccttgcttatggtgtcacttccgacgacctcgagcgc
gaattcggtcgctacggtccaattgagcgcattcgcatcgtcgaggacgttacccaaccc
gccgacgcaccactgaagaagcgaaagcgcggttatgctttcatcgtcttcgagcgcgaa
aaggacatgaaagccgcgtacaaggaaaccgacggaatcaagatcaaagaccgacgcgtc
ctcgtcgacgtcgagcgcggccgcaccgtatctggatggcgtcctcgtcgctttggtggc
gggctcggtggtcgaggctacaccaagggcccgtctgctcgtggtcccgctgctcccggc
ggctttggagctgccccagcaggtcctggtggctttggtggacgcggtggcttccagagc
ggcggtttcggcggacgtggcggaggcggaggcggcggcggaggcggcttcaggggtgga
tttggggcggtggccgtggaggtatcggctaccaaccaggcggctacggtggacccccag
atggtgcacctgccggacctcgaggcccgcgaggcggaggtttcggtggcgatcgtggag
gagggtaagaagcgtacattcaacccactcctaggcttgcttcattcgggatccgtctaa

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