Pyrenophora tritici-repentis: 6344016 Help Entry 6344016           CDS       T10215                                  Symbol PtrM4_106700 Name (RefSeq) Prp19 multi-domain protein   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism ptrr  Pyrenophora tritici-repentis Pathway ptrr03040   Spliceosome ptrr04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:ptrr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6344016 (PtrM4_106700)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     6344016 (PtrM4_106700)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ptrr03041]     6344016 (PtrM4_106700)    04121 Ubiquitin system [BR:ptrr04121]     6344016 (PtrM4_106700)    03400 DNA repair and recombination proteins [BR:ptrr03400]     6344016 (PtrM4_106700) Enzymes [BR:ptrr01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      6344016 (PtrM4_106700) Spliceosome [BR:ptrr03041]  Complex B   Other components    Prp19 complex     6344016 (PtrM4_106700)  Complex C    Prp19-CDC5 complex     6344016 (PtrM4_106700) Ubiquitin system [BR:ptrr04121]  Ubiquitin ligases (E3)   U-box type E3    6344016 (PtrM4_106700) DNA repair and recombination proteins [BR:ptrr03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     6344016 (PtrM4_106700) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_WDR3_2nd WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st Beta-prop_TEP1_2nd WD40_RFWD3 EIF3I WDR55 Beta-prop_Vps41 WD40_Gbeta Beta-prop_EML WD40_like B-prop_COPA_B_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 PEP5_VPS11_N Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_VPS8 eIF2A Beta-prop_RIG_2nd Cytochrom_D1 Beta-prop_NWD2_C U-box Beta-prop_IFT122_1st Beta-prop_WDR19_2nd NBCH_WD40 KNTC1_N Beta-prop_IFT122_2nd Beta-prop_WDR35_TULP_N Beta-prop_At4g14310 Beta-prop_CAF1B_HIR1 Frtz Hira Mcl1_mid CFAP43_N zf-Nse DUF3450 CNH Beta-prop_WDR75_1st V_ATPase_I_N DUF7899 VID27 Motif Other DBs NCBI-GeneID:  6344016 NCBI-ProteinID:  XP_001936095 UniProt:  B2W7H4 LinkDB All DBs Position 5:complement(<1792443..>1793950) Genome browser AA seq 471 aa AA seqDB search MLCAISGEAPREPVASRKSGNVFEKRLIEAHIAEHHTDPVTGEDLATEDLIELKSPNVVT PRAPNFTSIPAMLSAFQNEWDAIVLETHTLKQHLAQTRQELSTALYQNDAATRVIARITK ERDEAREALSNVTISGGGQGDAMQVDGQGLPEELVAVVDNTQQELFASRRKRAVPADWTS AEDVSRFDLAQTTDAIYPGASSVATSESNMVLFGGSDGNAGVYDLAEQKVVQTFNAGSAV TATAWCGDRAIVGTSAGTVKIFEQGKEIAQVGSHAGAITSMSLHPSGKMLATAGTDKHYA VHELTTFKTVSQVYVEAEITCISFHVDGMLFFVGSSDGNVRVYDIKTGTQMTSLEIGAPI VDLKFSENGTWFALVQQNSSSVTIWDIRKQSVVHTLESGSPATSCRWDHSSMYLAIGGTG SVSVQQFTKATKSWAELVRKAAPAKDIAWGGKAASLVALTPEGGLAVLAAP NT seq 1416 nt NT seq  +upstreamnt  +downstreamnt atgctttgcgcaatctctggcgaagctccccgcgaacccgttgcctcgcgcaagagcggc aatgtctttgaaaagcgtctcatcgaagcacacatcgcggaacaccacaccgatcccgtt acaggtgaggacctcgcgactgaggacctcatcgagctcaaatcgcccaatgttgttacc ccacgcgcgccaaacttcacgtcgatacctgccatgctcagcgccttccagaatgaatgg gatgccattgtattggagacacacacgctcaagcaacaccttgcgcaaacaaggcaggag ctgagcactgcgctataccaaaacgatgctgcaacaagagtgattgcacggattacaaaa gagcgcgatgaggcccgtgaggctctgtcgaatgttaccatcagcggaggcggccagggt gatgcgatgcaagttgatggtcagggtctgcctgaagagctcgtggcagttgtcgataac acacagcaagaattatttgcatcacgtcgaaagcgagctgtaccggccgattggacatct gcagaagatgtgtccagattcgacttggcccagacgaccgatgccatttaccctggcgcc agcagtgtcgctacaagcgaatccaatatggtattgtttggcggatcagacggcaatgcg ggcgtctatgacttggcagaacagaaggttgtacagacattcaacgcaggtagcgcagtt acagcaacagcttggtgcggagatcgtgcaattgttggaacttcggctggtacggtcaag atattcgaacaaggcaaggagattgcacaggtgggatcacatgccggagctatcacatcc atgtccctgcaccccagtggaaagatgctcgcaacagctggtaccgataagcactatgcc gtccacgaacttacgacgttcaagactgtctcgcaagtctatgtcgaggcggaaatcaca tgcatatcattccacgtcgacggcatgctctttttcgtcggcagctcagatggcaacgtt cgtgtctacgacatcaagaccggcacccagatgacatctctcgagattggcgctcctatc gtggatctcaagttctctgagaatggaacttggttcgctctcgtgcaacaaaactcttcc agtgttaccatttgggatatccggaagcagtcggtggttcatacgctcgaatcaggtagc cctgccactagctgcaggtgggaccacagcagcatgtacttggccatcggcgggacaggc agcgtgtcggtgcagcaatttaccaaggccacgaagagctgggccgagctcgttaggaag gcagcgccagcgaaggatattgcctggggtggcaaagctgcaagcctagtagctttgaca ccagagggtggtctagcggtactcgcagcgccctaa

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