Pyrenophora tritici-repentis: 6344091
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Entry
6344091 CDS
T10215
Symbol
PtrM4_105770
Name
(RefSeq) SpoVK, ATPase AAA+ class
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
6344091 (PtrM4_105770)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6344091 (PtrM4_105770)
03009 Ribosome biogenesis [BR:
ptrr03009
]
6344091 (PtrM4_105770)
04131 Membrane trafficking [BR:
ptrr04131
]
6344091 (PtrM4_105770)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptrr04147
]
6344091 (PtrM4_105770)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
6344091 (PtrM4_105770)
Ribosome biogenesis [BR:
ptrr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
6344091 (PtrM4_105770)
Membrane trafficking [BR:
ptrr04131
]
SNARE
SNARE associated proteins
Others
6344091 (PtrM4_105770)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
6344091 (PtrM4_105770)
Exosome [BR:
ptrr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
6344091 (PtrM4_105770)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_33
AAA_16
AAA_2
AAA_5
TIP49
AAA_22
AAA_14
CDC48_2
RNA_helicase
Mg_chelatase
ATPase
nSTAND3
AAA_7
AAA_28
Parvo_NS1
NPHP3_N
AAA_17
DUF815
AAA_24
AAA_25
AAA_18
IstB_IS21
Vps4_C
ResIII
PhoH
Zot
Motif
Other DBs
NCBI-GeneID:
6344091
NCBI-ProteinID:
XP_065962113
LinkDB
All DBs
Position
5:complement(<1575596..>1578263)
Genome browser
AA seq
819 aa
AA seq
DB search
MSAEPDHSKPKVDLSKNPDGAEPKDNDETATAILKKKKKPNSLIVTDAVNDDNSIIALSN
NTMETLQLFRGDTVLVKGKKRKDTVLIVLADDDLDDGSARINRVVRHNLRVKHGDVITIH
PCPDIKYAKRIAVLPIADTVEGITGSLFDVFLAPYFREAYRPVRQGDTFTARGGMRQVEF
KVVEVDPPEFGIVAQDTVIHCEGEPIQREDEEGNLNEVGYDDIGGCRKQMAQIRELVELP
LRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESE
SNLRKAFEEAEKNSPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVV
MAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIMQIHTKNMKLGDDVDLQTIAAET
HGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPSA
LREVAVVEVPNVRWEDIGGLEEVKRELIESVQYPVDHPDKFLKFGMSPSRGVLFYGPPGT
GKTLLAKAVANECAANFISIKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSI
AKSRGGSQGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDNALCRPGRLDTL
VYVPLPDLASRASIIKAQLRKTPVADDVDIDFIAQNTHGFSGADLGFVTQRAVKLAIKQS
IAIDIERRKAREAAGEDVDMEVDEEDPVPVLTKAHFEEAMRSARRSVTDVEIRRYEAFAQ
SMKNSGGSSFFRFPDAENAAAGADQNTFGAGGEDEDLYN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgaaccagatcactcgaagccgaaggtggacctttcaaaaaacccggatggc
gctgagcccaaagacaacgatgagaccgcaactgctatcctcaagaagaagaagaagcca
aactcgctcattgttaccgatgccgtaaacgatgacaactcgatcatcgcgctctcaaac
aacaccatggagactctccagctcttccgtggcgacacagttctcgtcaagggcaagaag
cggaaggacactgttctcatcgttcttgctgatgacgatctcgatgatgggtccgcgcgg
ataaaccgtgttgttcgccacaacttgcgggtcaagcacggcgacgttatcaccatccat
ccatgcccggacatcaaatatgccaagcgcattgcggtccttcccattgccgataccgtc
gagggtatcaccggctcgctatttgacgttttccttgccccatacttccgcgaagcctac
cgaccagttcgtcaaggtgacaccttcacagcacgcggtggtatgcgacaggttgagttc
aaggtcgtggaggttgacccgcctgagttcggtattgtggcacaagatacggtcatccac
tgcgagggcgagcccattcagcgtgaggacgaagagggcaacctcaacgaagtcggatac
gatgacattggtggctgccggaagcagatggctcaaatccgagagctggtcgagctgcca
ctgagacatccccaactcttcaagtcgatcggtatcaagcccccgcgtggtattctcatg
tacggaccgcccggtactggtaagacgttgatggctcgcgctgtcgccaacgagactggc
gcgttcttcttcctaatcaacggccccgagatcatgtccaaaatggccggtgagtccgag
tcgaatctgcgaaaggcatttgaggaggccgagaagaactctccggccatcatcttcatt
gatgagatcgattcgatagcgcctaagcgtgacaagaccaacggtgaagtcgaacgccgt
gtcgtctcgcaactgcttaccctcatggacggtatgaaggctcgatccaatgtcgtcgtc
atggccgccaccaaccgccccaactcgattgatcccgctcttcgtcgtttcggccgtttc
gatcgtgaggtcgacattggtatccccgaccctaccggccgtctggagattatgcagatc
catacaaagaacatgaagctcggcgacgatgtcgacctacagaccatcgccgcggagact
cacggttacgtcggttccgatttggcgtcgctttgctcagaggctgccatgcagcagatt
cgtgagaagatggacctcatcgatctggacgaggatactattgacgcagaagtgctggat
tcgctcggtgtaacaatggagaacttccgtttcgcccttggtgtctccaacccatccgca
cttcgcgaggttgccgttgtcgaggttcccaacgtccgatgggaggacattggtggtctg
gaggaggtcaagcgcgagctcatcgagtccgtacagtaccccgtcgatcaccccgacaag
ttcctcaagtttggcatgtctccatcgcgaggtgtgctattctacggtcctcccggtact
ggtaagacgctgcttgccaaggccgttgccaacgagtgcgctgccaacttcatctccatc
aagggtcccgagctgctctccatgtggttcggtgagtctgagagcaacattcgtgacatt
ttcgacaaggctcgtgctgctgcaccctgtgtcgttttcttggatgagttggattccatc
gccaagtctcgtggtggatcgcaaggcgacgctggtggcgcgtcggaccgtgtcgtcaac
cagcttctgactgaaatggacggtatgacatcaaagaagaacgtcttcgttattggtgct
accaaccgaccggagcagctggacaatgcactgtgccgtcctggtcgtctcgacacactt
gtctacgttcctctgcccgatttggcgtcacgtgccagcatcatcaaggcgcagttgcgc
aagactccggtcgctgacgatgtcgacattgacttcatcgcccagaacacacacggcttc
tccggtgctgatcttggtttcgtcacacagcgtgctgtcaagctcgccatcaagcagtcg
atcgcgattgacattgagcgccgcaaggctcgcgaagctgctggcgaggatgtcgacatg
gaggttgacgaggaggacccggtacctgtgctcaccaaggctcactttgaggaggcgatg
cgctctgctcgtcgctcggtgactgatgttgagattcgccgatacgaggcgtttgcgcaa
tcgatgaagaactctggtgggtcaagcttcttccgcttccccgatgcagagaacgcggcg
gctggggcggaccagaacaccttcggtgcaggcggtgaagacgaggatctatacaactaa
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