Pyrenophora tritici-repentis: 6344101
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Entry
6344101 CDS
T10215
Symbol
PtrM4_105650
Name
(RefSeq) WD40 repeat protein
KO
K14848
ribosome assembly protein RRB1
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptrr03009
]
6344101 (PtrM4_105650)
Ribosome biogenesis [BR:
ptrr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
6344101 (PtrM4_105650)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
CAF1C_H4-bd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_HPS5
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
PDS5
UL41A
Motif
Other DBs
NCBI-GeneID:
6344101
NCBI-ProteinID:
XP_001936180
UniProt:
B2W7Q9
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All DBs
Position
5:complement(1547232..1548759)
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AA seq
492 aa
AA seq
DB search
MSKRSADSEQEQEAIKNGERPMEIDQNEAGEFEDEFEDEFESEDEILEAGVDGRPDEERE
AEEREHGMDVDQDTFIPGRHKLSPGETLNPDLSTYEMLHALEAPWPCLSCDIIPDRLGSD
RKTYPATVYSVAGTQAARGRDKENQIMVMKMSSLSRMEKEDEEDDEDDSDDEASDPILET
KSIPLTSCTNRIRAHQTPQATSAQPPTTLTAAMTESGQVLIHDVTPHLTAFDTPGTTISP
SQNKPVCTIRAHGSNEGYALDWSPLIPEGKLLTGDSVGSIFATTRTQGGGFVTDTTPYTG
HKGSVEELQWSPTEKHVFSSASSDGTVKIWDARSKSRKPVLSVQASKTDVNVLSWSHQTA
HLLASGADDGEWAVWDLRQWKPSTDMSNDKKPSPVASYTFHKEQITSVEWHPTDDSIVLV
CAGDNTLTLWDLAVELDDEESKYTAGVQDVPPQLLFVHYMDQIKEAHWHPQIPGTIMATG
GSGFNVFKTISV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgatcagcagactcggagcaggagcaggaggctattaagaatggcgagcgt
cccatggaaattgaccagaacgaggcgggagaattcgaagatgaatttgaggatgagttt
gagagcgaggacgagatattggaggcgggtgtagatggacggccggatgaggagcgtgag
gctgaagagcgcgaacacggcatggatgtcgaccaagatactttcataccgggccgacac
aaactatcaccaggcgaaaccctcaaccccgatctgtccacatacgagatgttgcacgca
ctagaagcgccgtggccctgtctctcctgcgatatcataccggaccgtctcggttcagat
cgcaaaacgtaccccgctaccgtatactctgtcgccggtacccaggcagcgcgggggagg
gacaaagagaatcagatcatggtcatgaagatgagcagtctgtcgcgtatggagaaggaa
gacgaggaagatgacgaggacgattccgacgacgaggcctcagatcccatactagaaaca
aagtcaatacccttgacaagttgcaccaaccgcatacgagcacatcaaacaccacaagcc
acatctgcccagcctccaactaccctcactgctgccatgaccgagtccggccaagttctc
atccacgacgtcactccacacctcacagccttcgacacgcccggcaccacaatctcaccc
tcgcaaaataagcccgtctgcacaatccgcgcacacggatcgaatgagggctacgcgcta
gactggtcgcctctgataccagagggaaagcttttgacaggtgacagtgttggaagcatc
tttgcgacaacacggacacagggaggcggttttgtaacagacactactccatataccggc
cacaaaggctcagtcgaggagctacagtggtcgccaaccgaaaaacatgtcttttcgtca
gcgtcgagtgacggtaccgtcaagatctgggatgcgcgctcaaagtcacggaaaccagta
cttagtgtacaagcatcaaaaacagacgtcaacgtactcagctggtcgcaccagaccgca
catctcctcgctagcggtgccgatgacggtgaatgggcagtctgggacctgcgacagtgg
aagccttccaccgacatgtccaacgacaagaagccctcaccagtcgcatcctacaccttc
cacaaggagcaaatcacttcggttgagtggcatcccacagatgacagtatcgttcttgtt
tgcgccggcgataacaccctcacactatgggacttggctgtcgagctcgacgacgaagag
agcaagtacacagccggtgtacaagatgtgccaccgcaattgttgtttgttcactacatg
gatcaaatcaaggaggcgcactggcacccccagattccgggtaccatcatggctacaggt
ggctcaggtttcaatgttttcaagacgattagtgtatag
DBGET
integrated database retrieval system