KEGG   Pyrenophora tritici-repentis: 6344101
Entry
6344101           CDS       T10215                                 
Symbol
PtrM4_105650
Name
(RefSeq) WD40 repeat protein
  KO
K14848  ribosome assembly protein RRB1
Organism
ptrr  Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:ptrr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ptrr03009]
    6344101 (PtrM4_105650)
Ribosome biogenesis [BR:ptrr03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    6344101 (PtrM4_105650)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 CAF1C_H4-bd WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_HPS5 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th PDS5 UL41A
Other DBs
NCBI-GeneID: 6344101
NCBI-ProteinID: XP_001936180
UniProt: B2W7Q9
LinkDB
Position
5:complement(1547232..1548759)
AA seq 492 aa
MSKRSADSEQEQEAIKNGERPMEIDQNEAGEFEDEFEDEFESEDEILEAGVDGRPDEERE
AEEREHGMDVDQDTFIPGRHKLSPGETLNPDLSTYEMLHALEAPWPCLSCDIIPDRLGSD
RKTYPATVYSVAGTQAARGRDKENQIMVMKMSSLSRMEKEDEEDDEDDSDDEASDPILET
KSIPLTSCTNRIRAHQTPQATSAQPPTTLTAAMTESGQVLIHDVTPHLTAFDTPGTTISP
SQNKPVCTIRAHGSNEGYALDWSPLIPEGKLLTGDSVGSIFATTRTQGGGFVTDTTPYTG
HKGSVEELQWSPTEKHVFSSASSDGTVKIWDARSKSRKPVLSVQASKTDVNVLSWSHQTA
HLLASGADDGEWAVWDLRQWKPSTDMSNDKKPSPVASYTFHKEQITSVEWHPTDDSIVLV
CAGDNTLTLWDLAVELDDEESKYTAGVQDVPPQLLFVHYMDQIKEAHWHPQIPGTIMATG
GSGFNVFKTISV
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtcgaagcgatcagcagactcggagcaggagcaggaggctattaagaatggcgagcgt
cccatggaaattgaccagaacgaggcgggagaattcgaagatgaatttgaggatgagttt
gagagcgaggacgagatattggaggcgggtgtagatggacggccggatgaggagcgtgag
gctgaagagcgcgaacacggcatggatgtcgaccaagatactttcataccgggccgacac
aaactatcaccaggcgaaaccctcaaccccgatctgtccacatacgagatgttgcacgca
ctagaagcgccgtggccctgtctctcctgcgatatcataccggaccgtctcggttcagat
cgcaaaacgtaccccgctaccgtatactctgtcgccggtacccaggcagcgcgggggagg
gacaaagagaatcagatcatggtcatgaagatgagcagtctgtcgcgtatggagaaggaa
gacgaggaagatgacgaggacgattccgacgacgaggcctcagatcccatactagaaaca
aagtcaatacccttgacaagttgcaccaaccgcatacgagcacatcaaacaccacaagcc
acatctgcccagcctccaactaccctcactgctgccatgaccgagtccggccaagttctc
atccacgacgtcactccacacctcacagccttcgacacgcccggcaccacaatctcaccc
tcgcaaaataagcccgtctgcacaatccgcgcacacggatcgaatgagggctacgcgcta
gactggtcgcctctgataccagagggaaagcttttgacaggtgacagtgttggaagcatc
tttgcgacaacacggacacagggaggcggttttgtaacagacactactccatataccggc
cacaaaggctcagtcgaggagctacagtggtcgccaaccgaaaaacatgtcttttcgtca
gcgtcgagtgacggtaccgtcaagatctgggatgcgcgctcaaagtcacggaaaccagta
cttagtgtacaagcatcaaaaacagacgtcaacgtactcagctggtcgcaccagaccgca
catctcctcgctagcggtgccgatgacggtgaatgggcagtctgggacctgcgacagtgg
aagccttccaccgacatgtccaacgacaagaagccctcaccagtcgcatcctacaccttc
cacaaggagcaaatcacttcggttgagtggcatcccacagatgacagtatcgttcttgtt
tgcgccggcgataacaccctcacactatgggacttggctgtcgagctcgacgacgaagag
agcaagtacacagccggtgtacaagatgtgccaccgcaattgttgtttgttcactacatg
gatcaaatcaaggaggcgcactggcacccccagattccgggtaccatcatggctacaggt
ggctcaggtttcaatgttttcaagacgattagtgtatag

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