Pyrenophora tritici-repentis: 6344265
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Entry
6344265 CDS
T10215
Symbol
PtrM4_102670
Name
(RefSeq) BRCT domain type II
KO
K10754
replication factor C subunit 1
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03030
DNA replication
ptrr03410
Base excision repair
ptrr03420
Nucleotide excision repair
ptrr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
6344265 (PtrM4_102670)
03410 Base excision repair
6344265 (PtrM4_102670)
03420 Nucleotide excision repair
6344265 (PtrM4_102670)
03430 Mismatch repair
6344265 (PtrM4_102670)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrr03032
]
6344265 (PtrM4_102670)
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6344265 (PtrM4_102670)
DNA replication proteins [BR:
ptrr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
6344265 (PtrM4_102670)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
6344265 (PtrM4_102670)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_33
RuvB_N
AAA_16
AAA_22
nSTAND3
AAA_14
AAA_28
AAA_5
NACHT
AAA_18
Motif
Other DBs
NCBI-GeneID:
6344265
NCBI-ProteinID:
XP_065961925
UniProt:
A0A317A8P6
LinkDB
All DBs
Position
5:764120..767509
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AA seq
1059 aa
AA seq
DB search
MPADIRSFFGGGPPKPSQGSQSSQKKNEPTPKKAAPKKKGRTSRVVEDSDDEEEEDPQPK
KASPKKPPPKKVKREPTPEPVLEETTTSDFFASKNKPKRTEPVKKKAAETLKATPKKAPA
KATAKTSKNFTPASLAKTSGRAKKPVTSYEEKDDDDEFPDDDLDDADDIFEDNIKGKAKD
DYKEISESDDDVPVKLPHRGTPKAPAKQQKVIKDEDKFDPEDEDVDMKDIDADDDFVVPD
EEERAVKSTLKKTTASKKRKSPESEDEEEKPKKSRAKATPAKSPAKKKAKKEEVEDSADI
QAIYDSIPIVRAPTPPPKDENAKFDWKANAGRGEAAPLLGSSSDMPQGSDTCLAGLNFVF
TGVLQKWGRTESQELVKRHGGKVTTAPSKKTSYVVLGSDAGPSKLAKIRDMNIKTIDEDG
LTQLIEKLTAAGNKGDSKAQADYREKQRKEQEKIELLAAEMEKEEQKRQKEATAVAKAAA
KATGNKTAAATATAQNAGPAVDSRLWTTKYAPTSLSQICGNKTTVEKIQRWLQMFPKNLK
TGFKMAGKDGSGVFRAVILHGPPGIGKTTAAHLVAKLEGYDIVERNASDTRSKKLIEDGL
RGVLSTNSLHGYFAGDGKKVEGSKKKLVLIMDEVDGMSAGDRGGVGALAAVCKKTEVPMI
LICNDRRLPKMKPFDYVTYDLPFRRPTVDQIRSRIMTITFREGLKMPPAVINALIEGSHA
DIRQVVNMISTAKLDQTVMDFDKGKTMSKNWEKHVVLKPWDITQKILGGGMFASNSKATL
HDKIELYFNDHEFSPLMLQENYLGTNPIQSLSYSGKEKNLKNLELISKAADSISDGDLVD
RMIHGSQQQWSLMPTHAVFSFVRPASFVSGSTAGNQTRFTSWLGKNSTTNKLSRMIKEIQ
AHMRLRSSGDRHEVRQQYVPLLWTDLVQKLQKEGKEAVPQIIELMDSYYLTKDDFDAIME
LGVGPMDQEKVKIETQAKATFTRLYNQQSHPMPFMKASSVTQPKKQAKEKPDLEEAIDES
DDGEVIEEVKDEDEDIDLSKDKYPKGKGKAKAAPKGKKK
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgacattcgcagcttttttggcggcggccctcccaagccgagccagggcagc
cagagttcacagaagaagaatgagcctacacccaagaaggccgcgcctaagaagaagggc
cgtacgagcagagttgtagaagactctgacgacgaagaagaggaagatccacaaccgaag
aaagcatcccccaaaaagccgcccccaaagaaagttaaacgcgaacctacgccagaacct
gtacttgaagagacgaccacatcagatttcttcgccagtaaaaacaagcccaagcgaaca
gaaccagtcaagaagaaggccgcggagacactaaaggcaacacccaagaaagctcctgca
aaggcaactgcaaagacatccaagaatttcacaccagcgtcactcgccaaaacctctgga
cgagcgaagaagcctgtcacatcctacgaggagaaggatgatgacgatgaattcccggac
gacgacctggacgacgcggatgacatctttgaagacaacattaaaggcaaagcaaaagat
gactacaaagaaatctcggagagtgatgatgatgtaccagtgaaattaccacatcgcgga
acgccaaaggccccagcgaaacagcaaaaggtgatcaaggatgaggacaaatttgacccc
gaggacgaagacgtcgatatgaaggatatagacgcagacgacgactttgtagtacctgat
gaggaggaacgggcagtcaagagcacactaaagaagacgaccgcaagcaagaagcgtaaa
tcacccgagtctgaggatgaggaggagaagccaaagaagtcgcgcgcaaaggccactccg
gcaaagtcgccagcgaaaaagaaggcgaagaaggaagaggttgaagacagtgcagacatt
caggccatctacgacagcatccctatcgtacgcgcccctacgcctccacccaaagacgag
aatgcaaagttcgactggaaagcgaatgcaggtcgtggtgaggctgcgccgcttctgggc
tcatccagtgacatgccacagggctcggatacatgtctagcaggtttgaactttgtcttc
actggtgtgctgcagaaatggggccgaacagagagtcaagagttggtaaaacgacatggt
ggcaaagtcaccactgctcccagcaagaagactagttatgtcgttctaggctcagatgcc
ggtccaagtaaactggccaaaatcagggacatgaacatcaagacaatcgacgaggatgga
ctaacacagcttattgaaaagctaacagctgctggcaacaagggtgacagcaaagcacaa
gctgattacagggagaagcaacgcaaagagcaggagaagatcgagctgctggctgctgaa
atggaaaaggaggaacaaaagcgtcagaaggaagcgactgcagtggccaaagcagcagct
aaagcaactggtaacaagacagctgcggctactgcgactgctcaaaacgcaggacctgcg
gtggactctcgactatggaccacaaaatacgcacccacatcattgtcacagatttgcgga
aacaagacgaccgtggaaaagattcaacgatggctacagatgttcccgaagaacctcaaa
actggattcaagatggcaggtaaagatggcagtggggttttccgcgccgttatcctccac
ggaccacctggtatcggtaagactactgcagcacatcttgtcgcgaaactcgaaggctat
gacatagtcgagagaaacgcaagtgacacacgaagcaaaaagctcatcgaagacggtcta
cgcggcgttctaagtaccaattctctccacggatatttcgctggagatggaaagaaagtg
gaaggatcgaagaagaagcttgttctgatcatggacgaagtcgacggtatgtctgcggga
gatcgaggtggtgttggcgcgcttgcggcggtctgtaaaaagacggaagtgcctatgatc
ctcatctgtaacgaccgaagacttccaaagatgaagccattcgattacgtgacgtacgac
ctgccctttcgacggcctactgttgaccaaatccgatcacgcatcatgacaatcacattc
cgcgaaggcctcaagatgccacccgcagtcatcaacgcgctcatcgaaggcagccatgcc
gatatccgtcaagtcgtcaacatgatctctaccgcgaaactcgaccagaccgtcatggac
tttgacaagggcaagaccatgtctaagaactgggaaaagcatgtggttctcaagccatgg
gatatcacacagaagattctcggtggcggcatgttcgcttcaaacagcaaagctacactt
cacgacaagattgagctgtacttcaacgaccatgagttcagcccgctgatgttgcaggag
aactacttgggcacaaaccctattcagtcgctcagctattccggcaaggaaaagaacctc
aagaatctggagcttatatcgaaagcagccgatagcatcagcgacggtgatttggtcgac
cgcatgattcacggctcacagcaacagtggagtctaatgcctacacacgcagtcttcagc
ttcgttcggcccgcaagcttcgtctctggaagcacggcgggtaaccagacacgcttcact
tcatggctaggcaagaacagcacgaccaacaagctcagtcgaatgatcaaagagattcag
gctcatatgcggttgcggtcctcgggtgatcgacacgaggttcggcagcagtatgtccca
cttctttggacggatctagttcagaagctacagaaggaaggaaaagaagctgtaccacag
atcatcgagttgatggacagctactatctcaccaaggacgactttgatgcaatcatggag
ctgggtgtgggtccaatggatcaagaaaaggtcaagattgagacacaggccaaggcgacc
tttacacgactctacaaccaacagtcgcatccgatgcccttcatgaaggcctcctctgtc
acgcagcccaagaaacaagccaaagagaagccagatcttgaggaagccatcgatgaatcc
gatgatggcgaagttatcgaagaagtcaaggacgaggatgaagacatcgatttgtcaaag
gacaagtaccccaaaggaaagggcaaggcaaaggcggctcccaagggcaagaagaagtag
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integrated database retrieval system
