Pyrenophora tritici-repentis: 6344307
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Entry
6344307 CDS
T10215
Symbol
PtrM4_102210
Name
(RefSeq) DNA binding protein SART-1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6344307 (PtrM4_102210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
6344307 (PtrM4_102210)
04121 Ubiquitin system [BR:
ptrr04121
]
6344307 (PtrM4_102210)
Spliceosome [BR:
ptrr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
6344307 (PtrM4_102210)
Ubiquitin system [BR:
ptrr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
6344307 (PtrM4_102210)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
CH_2
Motif
Other DBs
NCBI-GeneID:
6344307
NCBI-ProteinID:
XP_001936384
LinkDB
All DBs
Position
5:complement(<657213..>659477)
Genome browser
AA seq
754 aa
AA seq
DB search
MLPAGYGQTTNDTFNFTLCIGTAHSLLWAADTCQNIGITFSSTYFRYDDTAESRFRFSHC
NLFTDPTLNYATTSAMGDKLSIDEANKIRLSMGMSALPGGSASAAPAAPSGLDFKPAHVD
DDPDAEPASTIDSREAAASDNWRKLEDERLAKLRREERAAKIKKEREKASRFAKLEGKGL
ADEEDVDDDMAWLKSSKKRQKKIAKEEQMRKELEERERQALEAMQYTDKDLAGVKVGHEL
DQFDDEDQILVLKDTAVDAEDEDELEAVALREKERLQDRLDSKKRKRAYDPNDMDEGGQK
SILGQYDEEIEGKKGKAFTLDGKGRTVEDMQAEVAGATRPKKVAISLDILKEDAPASDYM
DVSEVKMKKPKKKKSKKSKREHIADEEDWSMAPAEETAVDGMDVDGGEAAAPQQKKKKVF
DESFVDDDDLQANLAAQRQKALKKRKKIRPEDLARQLREEATTPQPDVLDSTEDGEAGLV
IDETTEFVQNLGAGGDDEDEARRKRRKSSHISEGTKSMGDIGVADEDGDVDMGQSYAEAA
EAEETRNRSVSRARSADITETGLEAEKTIDQGMGATLALLKQRGLVKESDASDKNTLYRE
RQKFLADKLKAEAEAERQRKIARERERGSARWNNMTPREREEWARKNNTSADMVESRRLA
DLFNKEYTPNVELKYVDEHGRQMNQKEAFKQLSHQFHGKGSGNTKTKKHLDKVAAEKKKM
AESSLEASRSGGGGLGNAFDDQAKKKGTAGVRLQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccgcaggttacgggcagacgacgaacgatacattcaactttaccctctgtatc
ggcacggcgcattcacttctctgggcagctgatacttgccagaacattggcattactttt
tcaagtacttacttccggtacgacgacaccgctgagtcgcgattccggttttcccactgc
aatttattcacagatccaactttgaactacgcgaccacatccgccatgggggacaaacta
tctatcgatgaggcgaacaagattcgcctgtctatgggcatgtctgctcttcccggtgga
agtgcatctgcagcgcccgcagcaccctcaggtctcgacttcaaacccgctcacgttgac
gacgatcccgatgcagagcccgcaagcactatcgactcgcgcgaggcggccgcctcggac
aactggaggaagttggaggatgagagactggccaagctcaggcgtgaagagcgtgctgct
aagatcaagaaggagcgcgagaaggcgtcgcgttttgcaaagctcgagggcaaggggctt
gctgatgaagaagatgtcgacgatgatatggcatggttgaagagcagcaagaagcgtcag
aagaagatcgccaaagaagagcagatgcgcaaggagcttgaagagcgtgagcgtcaggcg
cttgaggctatgcaatataccgacaaggacctggcgggtgtcaaagttggacacgagctt
gaccaatttgacgacgaagaccagattcttgttctcaaagacactgcagttgatgccgaa
gacgaagacgagctggaggcggttgcgctgagggagaaggagcgactgcaggaccggctc
gattccaagaagcgaaagcgtgcgtacgatcccaatgacatggacgagggtggccagaag
tcgatcctcgggcaatacgacgaggagattgaaggcaagaagggcaaggcgttcacactg
gacggtaaggggcgtacagtcgaagacatgcaagcagaagttgcaggtgcgacaaggcca
aagaaggtggctatcagcttggatatactcaaggaagacgcgcccgccagcgactacatg
gatgtttcagaagtcaagatgaagaagcctaaaaagaagaagagcaagaagtccaagcga
gaacacattgcagatgaagaagattggtccatggcccctgccgaggaaactgcagttgat
ggcatggatgttgatggtggtgaagccgctgcaccacagcagaagaagaaaaaggtcttt
gacgagtcgttcgtagacgatgatgatcttcaggcaaatctcgcagctcagcgtcagaaa
gccctcaagaagcgcaagaagatacgacccgaggacttggcacggcaactacgtgaggag
gcaacgacacctcagccagacgtgctcgattctaccgaagacggtgaagctggtctggtc
atcgacgaaaccaccgagttcgtacagaatttgggtgctggtggagacgacgaagacgaa
gctcgtcgaaaacgtaggaagtccagccatatctccgagggaaccaagtcgatgggtgat
atcggagtcgctgatgaagatggtgatgtggacatgggccaatcctatgctgaagcagcc
gaggcagaggaaactcggaaccgcagcgtatctcgggctcgctctgctgatattaccgag
actggtctcgaggctgagaagactattgaccagggtatgggtgccacactcgccctactc
aagcaacgaggcctagtcaaggagtccgacgccagcgacaagaacaccctctaccgcgaa
cgccaaaagttccttgccgacaagctcaaggctgaagcggaagccgaacgccaacgcaag
attgctcgtgagcgcgaacgaggctctgcccgctggaacaacatgaccccccgcgaacgc
gaggaatgggcccgcaagaacaacaccagtgcggacatggtagagagccgtcgcctcgcc
gatctctttaacaaggagtacacacccaacgttgagctcaagtacgtcgacgagcacggc
cgccagatgaaccagaaagaagccttcaagcagctcagtcaccagttccacggcaagggc
agtggaaacacaaagacgaagaaacatctcgacaaggttgctgctgagaagaagaagatg
gctgagagttcgctcgaggctagtcgtagtggcggcggtggactgggcaatgcgtttgac
gaccaggccaagaagaagggtacggcgggtgtgagactgcagtaa
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