Pyrenophora tritici-repentis: 6344313
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Entry
6344313 CDS
T10215
Symbol
PtrM4_102170
Name
(RefSeq) 90S preribosome component RRP12
KO
K14794
ribosomal RNA-processing protein 12
Organism
ptrr Pyrenophora tritici-repentis
Brite
Ribosome biogenesis [BR:
ptrr03009
]
Eukaryotic type
90S particles
Other 90S particles
6344313 (PtrM4_102170)
Pre-60S particles
Other pre-60S particles
6344313 (PtrM4_102170)
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NCBI-GeneID:
6344313
NCBI-ProteinID:
XP_001936390
UniProt:
B2W5P9
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Position
5:complement(639339..643242)
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AA seq
1282 aa
AA seq
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MSLEERLTKIRDNPKLQGQQQTHVLLSAIEDTLRQQKSEFTPTAYFAALLSLLARQITAQ
GIANKDTATATIYLLDLVTPNVPASLLRSKFTDILTNIAPALTAQDADAPLIRSSIGCLE
SLLVVQDARAWELPQTTISPRRAVAGLLQIAVDHRPKVRKRAQEALKKVLANPPPSPALD
HPAADMCAETAQKMLKDIAAEAAAKSRKNKGKKDADNKDPDLIHALQLIKTIATSSGGWP
SSKIDVLCELLLNISKSTNEFLTMAAFEIFEVIFAGMADELASAKLPRLLEVISELQPSK
NDTQLLPPWIAVISRGYEVSAQIEPEDTFMKLPDLFILIAEFLTSSSHNIRISASECLIS
FLVNLVPDSVILEPSIYDEKTLEKVAKIAQDLLSVKYQAAWMEVFSVLSAMFETLRWRSD
PILKPVLSVVGDLRGNDSFAGKKEADSVISRAISAMGPDVVLDILPLNLPRPPPGQTGRV
WMLPLLRDSVHNTKLAHFRAEMVPLSEELYQKVIDHGEKEKTMEIKVFETVVQQIWSILP
GYCDLPLDLVEAFDQSFCEMLANLLYGQADLRTDVCRALQNLVDSNKAIVELESEDDLLA
QARISKTDAKKNLEHLAGFASNMLAVLFNVYSQTLPQYRGTILRTINAYLSIIPEKELME
TFERVATNLEASLPEPGSQTQANKQKQETGPNKMPPMSHTLMDLIITIALYLPRDSYRSL
FRMAEIMINRENEPQLQKKAYKLIPRLAESEMGKAALKERNGELQQLLLGGAEKATAPAR
RDRLNALFQIIESLPQSDLHFIPSILSEVVISAKETNEKAREAAYNLLVAMGEKMAEGGQ
VIQAKVPNMPADAPTVEASLEEYFTMVSAGLAATTPHMISASITAVTRILYQFHSRLSKE
TITNLCDLMDIFLQNPNREIVRSVLGFVKVEVISLPESLVRPRLNVLLKNLMVWSHEHKA
HFKAKVKHIVERMVRKFGVEEVERCTPAEDRKLITNIRKTREQRKKKKQQAAEDGEEPTE
KRKGKFESEYDQAVYGSESEESEGDSEDEFVKSQSKQQRGGAKGGKTYIIEDEDEPLDLL
SKRALGNISSTKPLRQRKQPTKINARTNEDGKLILGDSDNETEIKGKKSKSKHIADDEDV
LMDIDDQNTSLEAGINAYVDAIRGRDTAQAGQKGRLKFSNKRTHEDDEMDMDDDGEEADW
QEVRKAKSGSGMGRGALKNGRGGQKPQRRALGQEKSRGGNVSGGEGRGGAKGRVEKTKSP
RGRGGHGGFRGRGMGGKWSGPK
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgaggagaggctgaccaagatccgggataacccgaaactgcagggtcagcag
cagacgcatgtgctgctctcagccatcgaagacacgctgcgccagcagaagtcggaattt
acgcccacagcatacttcgccgctttactttcgctgcttgcccgccagatcactgcgcag
ggtatcgcgaacaaggataccgcgacggcgactatctacctgctcgacctcgtcactccc
aacgtccccgcctcgctgttgcgctcaaaatttaccgacatcctcaccaatattgcgccc
gctctcactgcccaagatgccgatgcgccactcatccggtcttcaataggatgtttggag
tcattgctggttgtgcaagatgcgcgagcatgggagctgccacagacgacaattagcccg
cgcagggctgtcgcgggtctgctacagatcgctgtagaccacaggccaaaagtgaggaag
agggcgcaggaggcgctcaagaaagtgctggcaaacccgccaccgagccctgccctagat
caccctgcggcagacatgtgcgctgaaacggcgcagaagatgctcaaggacattgcggca
gaggcagcagccaaatcgcggaagaacaagggaaagaaggacgcggataacaaagatcca
gatctgatacacgctttgcagctcatcaaaacgattgcgacttcgtctggcgggtggccc
agcagcaagattgacgtcctgtgtgagctgctgttgaacatctcaaagtcgaccaacgag
ttcttgaccatggccgcctttgagattttcgaggtcatctttgccggtatggctgatgaa
cttgcgtctgcgaagctacccaggctcctcgaagtcatttccgaactgcagccctccaaa
aacgatacccagctccttccgccgtggatagcggtcatctcgcgaggctacgaagtttcc
gctcagatagagcccgaagacacttttatgaaactccccgaccttttcatactcatcgcc
gagttccttacatcctcatcacacaacatccgcatatccgcatccgaatgcctgatttcc
ttcctcgtaaacctcgtacctgacagcgttattcttgagccatccatatacgacgagaag
actttggagaaggtagcaaagattgcgcaagacttgctgagtgtcaagtaccaggctgcg
tggatggaggtgttcagcgtcctgtctgccatgttcgagacactcaggtggcgctcggat
cccatcctgaagcctgtgttgagcgttgtcggagatttgaggggcaacgacagcttcgcg
ggcaagaaggaggcggattctgtcatctcaagagccatcagcgcaatgggacctgacgtg
gtgcttgatattctccccttgaacctaccgcgaccgccacctggccagactggacgagtg
tggatgctgccgcttctgcgcgattccgtacacaacaccaagctcgcacacttcagagcc
gagatggttccgctgagtgaagagctttaccaaaaagtcatcgatcacggggaaaaggag
aagaccatggagatcaaggtattcgagactgttgtgcagcaaatttggtctattctgccc
ggctactgtgatttgccgctggatctggttgaggcctttgaccagagtttctgtgagatg
ctagcaaacctgctctacggccaagccgacctccgaacggacgtctgccgagccctgcaa
aacttggttgacagcaacaaagcaattgtggagctggaatctgaggacgatctactggca
caagctcgaatatcaaaaactgacgcaaagaagaatcttgagcacctagcaggtttcgcg
agtaacatgcttgcggtcctgtttaacgtatacagtcagactctgccgcagtaccgtggc
accatcctccggaccatcaacgcctatctgagcattatacctgagaaggaactcatggag
actttcgaacgagtcgcgactaacctggaggcttctctacctgagcctggctcccagacg
caagcaaacaagcagaagcaggagacagggccaaacaagatgccgccaatgagtcatact
ctgatggatctcatcatcaccatcgccctatacctcccacgcgacagttaccgttcgctt
ttccgtatggctgagatcatgatcaaccgggaaaacgagccgcagctacagaagaaagca
tacaagttaatcccacgtcttgcagaatctgaaatgggcaaagcagccctgaaagagcgc
aacggcgaactgcagcagttgttgctaggaggtgctgagaaggctacagctcctgcgcgg
agggatcgactcaatgctctattccagattatcgaatctttgccacaaagcgatctgcac
ttcatcccgtcaattctctccgaagtggtcatttccgccaaggagacaaacgaaaaggcg
cgagaagctgcttacaacctccttgtggcaatgggtgaaaagatggcagaggggggccaa
gtcatacaagccaaggtacccaacatgccggcggatgcaccgactgtggaagcttcgctc
gaggagtacttcaccatggtatctgctggtctcgctgccactaccccacacatgatttcc
gcgtccattactgccgtcactcgcatcctttaccagtttcattcgcggttatcgaaagaa
accattacaaacctctgtgatctcatggatattttcctccagaaccccaaccgcgaaatc
gtgcgcagtgtgcttggtttcgtcaaagtcgaagtcatttcgctaccagagtcacttgta
cgaccgcgactgaatgttctactgaagaacttgatggtgtggagtcatgaacacaaggcg
cacttcaaagccaaggtcaagcacattgtggagcgcatggtgcgcaagttcggtgttgaa
gaagtcgagcggtgcactcctgctgaggaccgcaagctcatcactaacatccgcaaaacg
cgcgagcaacgcaagaagaagaagcagcaagcggcagaggatggcgaagagccaactgag
aagcgcaagggtaagtttgaaagcgagtacgaccaagccgtgtacggcagcgaaagcgaa
gagagtgaaggcgattctgaagacgaattcgtcaagagccagagcaagcagcagcgaggc
ggcgcaaagggcggcaagacatacatcatcgaagatgaagacgaaccgctcgatcttctc
tccaagcgcgccctcggcaacatatcctccaccaagcccttacgccaacgcaaacagccc
acaaagatcaacgcccgcacaaacgaagacggcaagctcatcctcggcgactcagacaac
gaaaccgaaatcaagggcaagaaatccaagagcaaacacatcgccgacgatgaagacgta
ctcatggacattgacgatcaaaacactagtctcgaagccggtatcaacgcctacgtcgac
gccatccgcggccgcgatactgcccaagcaggtcaaaaaggtcgcctcaagttcagcaac
aagcgtacccacgaagacgacgaaatggacatggatgacgatggcgaggaggctgattgg
caggaagttcgcaaagcaaagtccgggtccggtatgggtagaggcgcactgaagaatggc
cgtggcggccagaaacctcagcgaagagctctaggccaggaaaagtcacggggtggcaat
gttagcggtggagagggaaggggtggggcaaagggaagagttgagaagacgaagagtccg
aggggaaggggtggtcatggagggtttagaggaaggggtatgggtggcaagtggagtgga
cccaagtga
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