Pyrenophora tritici-repentis: 6344483
Help
Entry
6344483 CDS
T10215
Symbol
PtrM4_046940
Name
(RefSeq) YccV multi-domain protein
KO
K10301
F-box protein 21
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptrr04121
]
6344483 (PtrM4_046940)
Ubiquitin system [BR:
ptrr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
6344483 (PtrM4_046940)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YccV-like
Transglut_core2
F-box-like
F-box
Elongin_A
F-box_4
Motif
Other DBs
NCBI-GeneID:
6344483
NCBI-ProteinID:
XP_065959264
UniProt:
A0A2W1E5N6
LinkDB
All DBs
Position
10:2267759..2269617
Genome browser
AA seq
598 aa
AA seq
DB search
MMQRPSFTALPTEILEAIFLNLDPHSLVSVSQTNRLIKRLTADAPIVWRHLCKTRFKTWD
SRHNIAAKFAGPLSDIDWRALYIRKHKIERRTRDLLNHVVATEQERIRYINDIADFGYDA
KEVLLRECACPDDAEDVLARRYYANAVLERIHREAAIKVWSNLGAGKDVPIERALGAYDV
FARVGEDVDVDVVADDISALANGLLEEYPLFRDWSPRVQASTLASYLRERGFNGVPDRSY
RALKNSFIGLVLRSAAHESLPLISVAIYCAVARLVGLDARPCGFLFHVYTLVYAPKNYNL
NGEYRPTSSTEREYMYLDPFRSTSEVRQGDLQRTLRDMGVPSSEHRSFLSDTTTREMVLR
TARNIMNSVQMIRDTEAGMGRIQASWMNSYPDMDNAFYATIWAMLLLGPTDDTSHLGHTA
TRRRQYLPYLLEHFQVHYPWDVTLLARYVIPMFYNQPEGHRLLQFVQSMQQVDAMRKPAI
TRSTRTNKVTFKVGQLFTHKRYRYEGVITGWDVACDQSEDWIQNMRVDNLPDGRNQAFYH
VLVCDKSVRYVAAENIQPVNENTGPSEALLKLAGRHFKRWDEASHCFVSNVRDEYPHD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcgcccctccttcacagccctcccgacggagattcttgaagccatcttcctc
aacctcgaccctcactcgctcgtatccgtgtcgcagaccaacaggctgatcaagcgtctc
acggccgatgcgccgattgtgtggcgccacctctgcaagacgcgcttcaaaacatgggat
tctcgccacaacatcgccgccaagttcgcgggtccactgtcggatatcgactggcgggcg
ctgtatatccgaaagcacaagattgagcgccgtacacgcgacttgctgaatcacgtcgtg
gctactgaacaagagcgcatacggtatatcaacgatatagctgactttgggtacgacgcg
aaagaggttttactgcgggaatgcgcctgtccagacgacgccgaggatgtgctggcgaga
aggtactatgccaatgccgtgttggagcgcatacatcgagaagccgcgatcaaggtgtgg
tcgaatttaggtgccggtaaagatgtgccgatagaacgcgcgctgggcgcatacgatgtc
ttcgcaagagtgggagaagatgtggacgtcgatgttgtcgccgacgatatcagtgcactt
gccaatggattgctagaagaataccccctctttcgtgactggagtccgcgggtacaggct
tccacactggcctcatatctgcgtgaacgcggcttcaacggcgtacccgaccggtcgtat
cgtgcgctgaagaactcattcattggcctcgttttgcgctctgcggctcacgaatcgctt
cccctcatttcagttgctatatactgcgccgtagcccgactagttggccttgatgctcgc
ccctgtggtttcctcttccacgtctacacgctcgtctacgcacccaagaactacaacctc
aacggcgaatacagaccgactagctccacggaacgagagtacatgtacctggatccattc
cgctccacgtccgaggtccgccagggtgatctccagcgcacgctgcgcgacatgggcgtg
cccagtagtgaacaccgcagtttcctcagtgacacgacgacgcgggaaatggtgctgcgt
acagcgcgcaacattatgaattccgtccaaatgatccgcgatacggaagctggaatgggc
cgcatacaggcttcatggatgaactcataccccgacatggacaacgccttttacgccact
atctgggctatgctgctcctcggacctacagacgatacctcgcacttgggtcacacggcc
actcgccgccgtcagtacctaccctacctcctcgaacacttccaagtacattacccctgg
gacgtgactctgctggcccgctacgtcatccccatgttctacaaccagcccgagggccac
cgtttgctgcagttcgtacagagtatgcagcaggtggatgctatgcgcaaaccggcgatt
acgcgctctacgcgcacgaacaaagtcacattcaaggttggtcagttgtttacgcataag
aggtataggtacgagggcgttattacgggttgggatgttgcgtgtgatcagagtgaggat
tggatccagaatatgcgggtggataatttgccggatgggcggaatcaggccttctatcat
gttttggtttgcgacaagtctgtcaggtatgtcgctgcggagaatatacagccagtcaac
gagaacacgggtccatcggaggcgcttttgaaacttgcgggtcgccactttaagcggtgg
gatgaggcgagtcattgttttgtgagtaatgtgagggatgagtatcctcatgattag
DBGET
integrated database retrieval system
