Pyrenophora tritici-repentis: 6344628
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Entry
6344628 CDS
T10215
Symbol
PtrM4_048440
Name
(RefSeq) PolB, DNA polymerase elongation subunit (family B)
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03030
DNA replication
ptrr03410
Base excision repair
ptrr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
6344628 (PtrM4_048440)
03410 Base excision repair
6344628 (PtrM4_048440)
03420 Nucleotide excision repair
6344628 (PtrM4_048440)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrr03032
]
6344628 (PtrM4_048440)
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6344628 (PtrM4_048440)
Enzymes [BR:
ptrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
6344628 (PtrM4_048440)
DNA replication proteins [BR:
ptrr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
6344628 (PtrM4_048440)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
6344628 (PtrM4_048440)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Rossman_Mical
Motif
Other DBs
NCBI-GeneID:
6344628
NCBI-ProteinID:
XP_065959333
UniProt:
A0A2W1F2U7
LinkDB
All DBs
Position
10:<2699288..>2705143
Genome browser
AA seq
1951 aa
AA seq
DB search
MAYDIETTKLPLKFPDAAIDQIMMISYMIDGQGFLITNREIVSEDIQDFEYTPKPEYQGP
FMIFNEPDEKALLERFFEHIKIAKPTVIVTYNGDFFDWPFVEARSSVQGIDMYQEIGFRK
NSEDVYQSDYCAHMDAFCWVSRDSYLPQGSRGLKAVCLAKLGYDPDELDPELMTPYAAER
PQTLAEYSVSDAVATYYLYMKYVHPFIFALCKILPLGPDDALRKGTGTLCEMLLMVQAYQ
KGIVLPNKHQAPKEAFWEGHLLESETYVGGHVEALEAGVFRSDIAYNFAVDPTAIDELLN
DLDAALKFSIEVEEKKKMEDVTNYDEIKAEIVEKLLQLRETPNRSERPLIYHLDVASMYP
NIMTTYRLQPDSMINEGNCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMVRNALEN
EQFPGRFPNSPKRTFQDLSADEQATLIRKRLTDYSKKIYHKVHDATTIEREAIICQRENP
FYVDTVSGFRDRRYDFKGKQKVWKGKTEALKAAGAPASEIEDAKKMIILFDSMQLAHKVI
LNSFYGYVMRKGSRWYSLEMAGVTCLTGARIIQLARSLVERIGRPLELDTDGIWAILPAT
FPENFSFKLSNGKKLTISYPCTMLNHLVHAQYTNHDYETLVDPETFRYEKHSDNSIFFEV
DGPYKAMILPTSKEEDKNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKNFQAQIFKFF
LEGTTLEETYGAVAKVANRWLDILDTRGATLADEELIDLIVENKNMTKTLEEYGTQKSTA
ITTAKRLAEFLGEQMVKDKGLNCKYIISKTPRNAPVTERAVPLAIFSAEESVKRYFLRKW
LREDPGEMDIRTILDWDYYRERLASVIQKLITIPAAYQKVRNPVPRVPHPDWLNRRIRQK
EDKLQQTKMTDMFSKKVLTNGDANVANNKGSGDLEDFGSSKLTQNQSQMKKGIVTKMVAK
RKEPEPAVPIVDPYAALPKVMPSIDKDYSGWLMYQKQKWKIQKEARKRRRQLFGEKAVDS
SDAIGTFFRNQAQSLYISTWQLVQLRPTETPGEVRAFVLIDKKIHALKIIVPRQLYLNLR
SEDLPDVSISGCSVEKVVNHTLPNGHPSIHLFKLQMSEETYVNEAKTISALFNHSSVEGV
YEKQVPLNIRAILELGSTCTFDETQKGVLGKGLEQGFDLSSLHKVRTKEPYLAEAPFNYL
YLYHVSSGDRNIYAIFSTSKSDAHIIIQNKSKDSQGMPNVDRIYRDALQRRLEDNNGEPW
QAMIEYQDDIHFKTTMVTTKRKALLEIGDVIKRMKADESGPVIVVMQSPNHALLSHDVPI
LKDMPILPLHPDESDKQLPPLGWQAFIARRLVGHYLDLGSWVAHLLELARYGDVPLCNLE
SNDPRFLIDVAYARRLQKDRVILWWSGQAKPDHAGYEKDDVLAPLETVEMPSINNPGTYS
SVCIDINVRNLAINTILSSSLVNELKGADSVSFNPAPSYDSTNDGSNVFHSDNAFASAGI
TVLREMVKDWWVEAVQANHGFSMADVMVQHLVRWVSSPGSFLYDRSLHYYVQMMSKKTLQ
QLMTDFKRVGSHIVFASPNRLLLQTTKAEVGNAYSYSQYIIKTIKLKPLFQFMELEIKEY
WDYLVWYDEFNYGGKGCSEVTEDENQPVENIMCWQLAQFLPPKFQPTFNDWVVEFIELMH
ARKRPQITEDGSTPRVTQIPLRPLTVDPNEQTQLLPKTFTKPLSKQMNVFAKKQHAEILD
PLFASDYVFPELPGSHLKFNNAVLQLVKSIMQVLSLDRAISLEARALRKELLNLFDIKEF
SAEATFVNPSAALVVRGVICDECTSSRDLDLCRDSSLLPVVVSNNSDAAPVLPKWKCDNC
ESSYDKRRIEEQLVGEVQKMVLEWCTQDLKCAKCKRLRSNEFMEHCACAGEWVATKNRQD
MKKRAMVYGNVAKFYALGMLEAVVEECLEAF
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacgatatcgaaacgacaaagttaccactcaagttccccgacgctgccatcgat
cagatcatgatgatatcatatatgattgacggccagggttttctaatcaccaaccgcgaa
atcgtatcagaagacatccaggatttcgaatacacgccgaagccggaataccaaggtcct
tttatgatcttcaacgagccggacgagaaggccctgctggaacgattctttgagcacatc
aagatagctaagccaacagtcatagtcacgtacaacggagacttcttcgattggccattc
gtcgaagcaaggtctagtgtacagggcatcgacatgtaccaagagattggcttcaggaag
aacagcgaggacgtatatcagtcggactactgtgcgcatatggatgctttctgctgggtc
agccgagacagttatcttccacaaggaagtcgtggtctgaaagctgtctgcttggctaag
ctcggctacgacccagacgaactcgaccccgagttgatgacaccgtatgctgctgagcgg
ccccagacccttgcagagtactccgtttccgacgctgttgcgacttactatctgtacatg
aaatatgtgcaccccttcatcttcgctctgtgtaagattctcccattaggtccggatgat
gcgctacggaagggtacaggtaccctatgtgagatgctgttgatggtgcaggcatatcaa
aagggcatcgtattgcctaacaaacatcaagcaccgaaggaagccttttgggaaggtcac
ctactggaatcggagacctatgtcggaggtcacgtcgaggcgctggaagctggcgtgttc
agaagcgacattgcctataacttcgctgtcgatcctacggccatcgatgaattactgaac
gatctcgacgcggcactcaagttcagcatcgaagtggaagagaagaagaagatggaggat
gttaccaactatgacgagatcaaagctgaaatcgtcgaaaagttgttgcagctcagggaa
acgcctaaccgcagtgaacgaccgctgatttaccatttggatgtcgcatctatgtacccg
aacattatgacaacatatcggttacaaccagattctatgatcaatgaaggcaactgcgca
gcctgcgactttaaccgcccgggcaagacctgcgatcgccggatgccgtgggcctggaga
ggtgaatacctacctgccaagcgtgacgaatacaacatggttcgcaacgccttggaaaac
gagcagtttccgggcaggttccccaattcgccaaagcgcacctttcaagacctctcggcg
gatgaacaggccaccttgatcaggaaacgtctaacggactactccaagaagatttaccac
aaggtgcacgacgctactacaatcgaacgcgaagccatcatctgccagcgtgagaaccca
ttctacgttgacaccgtcagtggcttccgtgaccgccgatacgacttcaagggcaagcag
aaggtgtggaagggaaagaccgaggctttgaaagcagctggcgctcctgcgagcgagatt
gaggacgcaaagaagatgatcattctgttcgactctatgcagttggctcacaaagtcatt
ctgaactccttctacggatacgtcatgcgaaagggatctcgttggtactcactcgaaatg
gctggtgttacttgcttgactggtgctcgtatcattcagttggctcgctctctggtagag
cgcattggacgacccctagagctggatactgacggtatttgggccattttacctgcgacg
ttcccggaaaacttctctttcaaactcagcaacggcaagaaactgaccatctcgtatccc
tgtacgatgttgaaccacttggttcacgcacaatataccaatcacgactacgagacacta
gtagaccccgagacgtttcgttacgagaaacacagcgacaactccatcttcttcgaagtc
gacggcccgtacaaggctatgattctccctacatcgaaagaggaagacaagaacttgaag
aagcgctatgcagttttcaatcacgatggcagcttggcagagctgaagggtttcgaggtc
aagcgtcgtggtgagttgaagctcatcaagaacttccaagcccagattttcaagttcttc
ttggagggtacaacgctagaagagacgtacggtgcagttgccaaggtagcgaaccgatgg
cttgatattctggacactcgcggcgccaccttggccgatgaagagctgattgatctcatt
gttgagaacaagaacatgacgaagacgctggaggaatacggaacgcaaaagtcgactgcc
attacgactgctaagcgtcttgctgaatttttgggcgagcagatggtaaaagacaagggc
ttgaactgcaagtacatcatctcaaagacgccgcgaaacgcaccggtcactgagcgtgcc
gttccactggcaattttctcagccgaagagtcagtaaaacgatacttcttgaggaaatgg
ttacgcgaagaccctggagagatggacattcggacaatattggactgggactactaccgc
gagcgcctggcatccgtcattcagaagctcatcaccattccggcagcctaccagaaagtt
cgaaaccctgttcctagggtaccgcacccagactggctcaaccgcaggatccggcagaag
gaagacaagctccaacagaccaagatgacggacatgttcagtaagaaagtgctgaccaat
ggtgacgccaacgtcgcgaacaataaggggtctggagacttggaagactttggctcttcc
aagttgacgcagaatcagtcgcagatgaagaaaggtatcgtcaccaagatggttgcgaaa
cgtaaggagcccgagccggccgtacccattgtcgacccatatgcagcgctacctaaggtc
atgccgagcattgacaaagactactccggttggttgatgtaccagaaacaaaagtggaag
attcagaaagaggcacggaagcgaagacggcagttgttcggagagaaggccgttgattcg
tcggatgcgattggcaccttcttcaggaaccaggctcaatctctgtacatcagcacatgg
cagcttgtacaactacgaccgacggagacaccaggagaagtccgcgctttcgtgttgatc
gacaagaaaatccacgccctcaagattatcgtaccacgacaactatacctcaacttaaga
agcgaggatcttcctgatgtttctattagcgggtgctcggtcgaaaaggtcgtcaatcat
accttgccaaacggacatccttctatccatcttttcaagctccagatgtccgaggaaact
tacgtcaacgaagcaaaaaccatttcggctctcttcaatcactctagcgtcgaaggtgtc
tacgagaagcaggtaccactcaacatccgggccatccttgagctcggtagcacatgtaca
ttcgatgaaacacaaaagggtgttctcgggaagggtctcgagcaaggtttcgacctatct
tcgctgcacaaagtacgaaccaaggagccatacctggctgaggcgcccttcaactacctg
tacctctaccatgtcagtagtggagaccgcaatatatatgccatcttctcgacctctaag
agtgatgcgcatatcatcatccagaataagtcaaaggactctcagggtatgcccaatgtg
gatcggatctaccgcgatgctctgcagcgacggttggaagacaacaacggcgagccatgg
caagccatgattgagtaccaagacgatatccacttcaagactacaatggtcactaccaag
cgcaaggctctactggaaattggggacgtcatcaagaggatgaaggcagacgaatctggg
ccggtcattgtcgttatgcaatcaccaaaccacgctcttctttcacacgacgtacctatc
ctcaaggatatgcccatcctaccactccatcccgatgagtctgacaagcaactaccgcca
ctcggttggcaagcgttcattgccagacggttggtaggccattaccttgatctcggatcc
tgggttgcacatctactggagcttgcccgttacggagatgtcccgctctgcaatctcgag
agcaacgacccccgcttcctcattgatgtggcgtatgcaagacgcttgcagaaggaccga
gtgattctatggtggtctggtcaggcgaagccggatcacgctggttatgagaaggacgat
gtccttgcacctctggaaacggtggagatgccgtccatcaacaacccgggtacctactcg
tctgtatgcatcgacatcaatgtgcgcaatctcgccatcaacactatcctgtcatcgtct
ctagtcaatgagcttaagggcgcagactccgtttctttcaatcctgctccgtcttatgac
tctacaaacgatggctccaatgtctttcactctgacaacgcctttgcaagcgcgggtatc
actgttcttagagagatggtaaaggactggtgggttgaggctgtccaagccaatcacggt
tttagtatggcagatgtgatggtacaacacctcgtccgctgggtcagcagtccaggatcg
ttcctctacgatcgttctctgcactattacgtgcaaatgatgtctaagaagacgctacaa
caactgatgacggactttaagcgcgtaggctcacacatcgtcttcgctagtccgaaccgc
cttctgctacagaccaccaaagccgaagttggcaacgcatactcgtacagtcaatacatt
atcaagacaatcaagttgaagccgctgttccagttcatggagctcgaaatcaaagagtac
tgggactacctagtctggtacgatgagttcaactacggaggcaagggctgcagcgaggtg
acggaagacgagaaccaacctgtcgagaatattatgtgctggcagctagcacagttcttg
ccaccaaagttccagcccacgttcaacgactgggtcgtcgagttcatcgagctcatgcac
gcgcggaaacgccctcagatcacagaagacggctcaacgccgcgggtcactcaaattcca
ctgcgtccgctgaccgtggatccgaacgagcaaacacagttgcttcccaagacgtttacc
aagccactgtcaaaacagatgaatgtgtttgccaagaagcaacacgcagagattctggac
cctctcttcgcatccgattacgtcttccccgaactcccaggctcgcatctcaaattcaac
aatgcagtcctgcagctcgtcaaaagtatcatgcaagtcctctccctcgaccgcgccata
tctctcgaagcacgcgcgctgcgaaaagagctcctcaacctcttcgacatcaaagagttc
agcgcagaagcaacctttgtaaaccccagcgccgccctcgtagtccgaggcgtcatctgc
gacgaatgcacctcgtctcgcgacctagacctctgccgcgactcctcgctgctccccgta
gtcgtctccaacaatagcgacgccgctcccgtgctgccaaagtggaaatgcgacaactgc
gaatccagctacgacaaacgccgcatcgaagagcaactcgtgggcgaggtccagaaaatg
gttctcgaatggtgcacacaggatctcaaatgcgcaaaatgtaagagactacggtcaaac
gagttcatggaacattgtgcttgtgcgggcgagtgggtggcaacgaagaacaggcaagat
atgaagaagagggctatggtatatgggaacgtggcgaagttttatgctctgggtatgttg
gaggctgtggtggaggagtgtttagaggccttctag
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integrated database retrieval system
