Pyrenophora tritici-repentis: 6344630
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Entry
6344630 CDS
T10215
Symbol
PtrM4_048460
Name
(RefSeq) hypothetical protein
KO
K11087
small nuclear ribonucleoprotein D1
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6344630 (PtrM4_048460)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
6344630 (PtrM4_048460)
03032 DNA replication proteins [BR:
ptrr03032
]
6344630 (PtrM4_048460)
Spliceosome [BR:
ptrr03041
]
Complex A
U1 snRNP components
Sm proteins
6344630 (PtrM4_048460)
U2 snRNP components
6344630 (PtrM4_048460)
Complex B
U1 snRNP components
6344630 (PtrM4_048460)
U4/U6.U5 tri-snRNP components
6344630 (PtrM4_048460)
Complex C
U2 snRNP components
6344630 (PtrM4_048460)
DNA replication proteins [BR:
ptrr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
6344630 (PtrM4_048460)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
PilM_2
Motif
Other DBs
NCBI-GeneID:
6344630
NCBI-ProteinID:
XP_001936705
LinkDB
All DBs
Position
10:complement(<2707491..>2708255)
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AA seq
94 aa
AA seq
DB search
MKLVRFLMKCQNETVTVELKNGTIVNGTITSVSPLMNVALRAVKYTPKSRDTVALDTMTV
RGSTIRYIILPDSLPLDTLLIDDAPKPKNKARKE
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttcttatgaaatgccagaatgagacggtcacggtcgagctgaag
aatggcactatcgtcaacggtaccattacctctgtttcgccgctcatgaacgtcgcactt
cgagcagtcaagtacacccccaagtctcgagacaccgtagcgctcgacacgatgactgtg
cgtggctcaactatccgctacataatcttacccgactcattaccgctcgatacactactc
attgatgacgcaccaaagccgaagaacaaggcgaggaaggaatga
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