Pyrenophora tritici-repentis: 6345011
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Entry
6345011 CDS
T10215
Symbol
PtrM4_052950
Name
(RefSeq) TFB3, Cdk activating kinase (CAK)-RNA polymerase II factor
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03022
Basal transcription factors
ptrr03420
Nucleotide excision repair
Brite
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
6345011 (PtrM4_052950)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
6345011 (PtrM4_052950)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
6345011
NCBI-ProteinID:
XP_065959543
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Position
10:3814166..3815173
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AA seq
289 aa
AA seq
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MSKSARTSGASKRLAEDGDICPVCKSSRYLNSTMQFKINPTCYHRMCDTCVERLFNKGNN
ICPVAGCAKTLTYRGFRRATFDDLKVEREVDLRKKVMKIMNKKEDDFETLRDYNDYLEQV
EEITWNLILNIDVEATNNKLARFDALQKAEAANAGASKAGKPNTVPTKDDNDIVFHGLKK
RIPPPKEIPFDPWGGYNITPQYYVLQDNYDVDWYTRMKKDPAHLVGGHSLQDYCSRALRE
AFGGLGVFIEDEINARDAPSIPSMDADVGTEHAAAAAMTTGEVNMDDIF
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatcagcacgtacgtctggcgcgtcgaagcgtctggccgaagatggagacatt
tgccccgtatgcaaatcgtcgcgctatctcaactctaccatgcagttcaagatcaacccg
acatgctaccaccgtatgtgcgatacatgcgtagagcgattgttcaacaagggaaacaac
atctgtcctgtggcgggatgcgcgaagacgctcacctacagaggttttagaagggcaacc
tttgacgatctaaaggtggagagagaagtggacctgaggaaaaaggtcatgaagattatg
aacaagaaggaagacgactttgagacgctcagagactacaacgattacctcgaacaagtc
gaagaaatcacatggaacctcatcctcaacattgacgttgaggcgacgaacaacaaattg
gcgcgcttcgatgcgctccagaaagccgaggcagcaaatgcgggcgcgtccaaggctgga
aaaccaaacacggtaccaaccaaggacgataacgacattgtcttccatggtctcaaaaag
cgcattccgcccccgaaagagataccgttcgacccatggggcgggtacaacatcacaccg
caatactatgtattgcaggacaactacgacgtcgactggtatacacgtatgaagaaggac
cctgcgcatctggtaggaggacacagtctacaagattactgcagtcgggcattgcgcgag
gcatttggcggtttgggcgtcttcatcgaagacgagatcaacgccagagacgcgccttca
ataccatccatggacgcagacgtcggaacagagcatgcagctgcagcagccatgaccaca
ggcgaagtcaacatggacgacatcttttag
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