Pyrenophora tritici-repentis: 6345261
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Entry
6345261 CDS
T10215
Symbol
PtrM4_044090
Name
(RefSeq) SrmB, Superfamily II DNA and RNA helicase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ptrr Pyrenophora tritici-repentis
Brite
Enzymes [BR:
ptrr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6345261 (PtrM4_044090)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
6345261 (PtrM4_044090)
mRNA cycle factors
Common to processing body (P body) and stress granule
6345261 (PtrM4_044090)
Spliceosome [BR:
ptrr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
6345261 (PtrM4_044090)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
6345261 (PtrM4_044090)
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Ortholog
Paralog
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GFIT
Other DBs
NCBI-GeneID:
6345261
NCBI-ProteinID:
XP_065959072
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Position
10:complement(1508458..1510270)
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AA seq
517 aa
AA seq
DB search
MSDAGAADAVVNPADARKEQMAQDLAKAKEAGWTDPVPFEYENPATGAPVEDETRDNVAW
LSDAAIYQWDDDFGDVGDPNPELEKMLFNDEFHQRAGQAIKALSFEVTVEGPHKLNPVRN
FEDAGLHPVMLENVKLCQYAYPTPIQAYCIPAVLTGNDVVAIAQTGSGKTAAFLVPILSK
LMGKARQLAAPRPNPIHYNPLTDKVRAEPLVLVICPTRELACQTFDEARRLCYRTMMRPC
VVYGGAPSKNQREQLELGCDILIATPGRLMDFAQNANLLSFRRLKFTVIDEADELLSSDW
EDVMEKIFQGGDTNTDADHTYLMFSATFPKAARRVAKEYMADDFFRIKVGRVGSTHENIK
QQIIWAEENAKNQALFDLIFSEGPQRTLVFTNSKAKCDMVDDFLYNKGLPVTSIHSDRTQ
REREDALRSFRTARCPILVATGVTARGLDVANIKHVINYDLPSTMHEGITEYIHRIGRTA
RIGNEGKATSFFNDRNDDIGEDLTKILPDCDRLARRH
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcaggcgcggccgacgccgtggtcaatcctgccgatgcccgcaaggagcag
atggcacaggaccttgccaaagccaaagaggctggctggactgatccagtgcccttcgag
tacgagaaccctgccactggtgctcctgttgaggacgagacccgcgacaacgtcgcgtgg
ctctctgatgcagccatctaccagtgggacgacgactttggcgatgttggcgatcccaac
ccagagttggaaaagatgctcttcaatgatgagttccatcagcgcgctggtcaagccatc
aaggcgctttccttcgaggtcactgttgaaggcccccacaagctcaaccctgtgcgcaac
tttgaggacgctggtctgcatcccgttatgcttgaaaacgtcaagctgtgccagtatgcg
tacccgacacctatccaggcgtactgtatccctgctgtcctgactggaaatgacgttgtc
gctatcgcacagactggttccggaaagactgcagctttccttgtccctatcctgtccaag
ctcatgggcaaggcccgccaactggctgcgcctcgtccgaacccgattcactacaaccct
ctgactgacaaggtccgcgctgagccgctggtcttggtcatctgccctacgcgagagctt
gcctgccagacgttcgacgaggcccgtcgtttgtgctaccgcaccatgatgcgtccttgt
gtcgtctacggtggagctccttcaaagaatcagcgtgagcagctggagttgggttgtgat
atcctcatcgccaccccaggtcgactcatggatttcgcccagaacgcgaacctgctctcg
ttccgtcgtctcaaattcaccgtcatcgatgaggctgatgagctgctctcctccgactgg
gaagacgtcatggagaagattttccagggcggtgacaccaacactgatgctgatcacacc
tacctcatgttctccgccactttccccaaggcggctcgtcgtgttgccaaggagtacatg
gctgatgacttctttcgcatcaaggtcggccgagtcggcagcacccatgagaacatcaag
cagcaaatcatctgggcagaggagaatgcaaagaaccaagcgcttttcgacctgatcttt
tccgaaggtcctcagcgtacactggtcttcaccaactccaaggccaagtgtgacatggtc
gatgatttcctctacaacaagggtctgcctgttacttcgattcactcggatcgtacccag
cgtgagcgtgaggatgccctgcgctccttccgcactgctcggtgtcccatcttggtcgct
actggcgtcactgctcgtggcctggatgtagccaacatcaagcacgtcatcaactacgat
ctgccttcgactatgcatgaaggcatcaccgaatacattcatcgcattggccgtaccgct
cgtattggtaacgagggcaaggctacttccttcttcaacgaccgtaacgacgatatcggc
gaggatctcaccaagatcctacccgactgcgatcgactggcacgacggcactga
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