KEGG   Pyrenophora tritici-repentis: 6345270
Entry
6345270           CDS       T10215                                 
Symbol
PtrM4_043990
Name
(RefSeq) RpoZ, DNA-directed RNA polymerase, subunit K-omega
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
ptrr  Pyrenophora tritici-repentis
Pathway
ptrr03020  RNA polymerase
ptrr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ptrr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    6345270 (PtrM4_043990)
  09124 Replication and repair
   03420 Nucleotide excision repair
    6345270 (PtrM4_043990)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptrr03021]
    6345270 (PtrM4_043990)
   03400 DNA repair and recombination proteins [BR:ptrr03400]
    6345270 (PtrM4_043990)
Transcription machinery [BR:ptrr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     6345270 (PtrM4_043990)
  RNA polymerase III system
   RNA polymerase III
     6345270 (PtrM4_043990)
  RNA polymerase I system
   RNA polymerase I
     6345270 (PtrM4_043990)
DNA repair and recombination proteins [BR:ptrr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      6345270 (PtrM4_043990)
SSDB
Motif
Pfam: RNA_pol_Rpb6 KH_1
Other DBs
NCBI-GeneID: 6345270
NCBI-ProteinID: XP_001937329
UniProt: B2WBI5
LinkDB
Position
10:1485449..1486090
AA seq 163 aa
MSDYGGDDYGGDAGDMGDDHAIDFDEEAEPDLMDDEDDQPGGGEDPDNADPNDDNVVVSG
DANAAAAAKEASKNTVTSEKDKRVPNEKRTTTPYMTKYEKARVLGTRALQISGNAPVLID
VEGMTDPLQIAAKELQEKKIPLVVRRYLPDGFYEDWTCEELLT
NT seq 492 nt   +upstreamnt  +downstreamnt
atgtctgactacggcggcgacgactacggcggtgatgctggggacatgggggatgaccat
gccatcgactttgacgaggaagcggaacccgatctgatggacgacgaagacgaccagccc
ggcggcggcgaagacccagacaatgccgaccccaatgacgacaatgtagtagtgtcaggc
gatgccaacgcggcagctgcagccaaagaagcctccaagaatacagttacaagtgaaaag
gacaagagagttcccaacgagaagcgcacaaccacgccatacatgaccaagtacgaaaag
gcgcgtgtgctgggtacaagggcacttcaaatcagtggtaacgctccggtgctgatcgac
gtagagggtatgacggatcccctccagattgctgccaaagaattgcaggagaagaagatt
cccctggttgtacggcgctaccttcctgatggcttttacgaggactggacttgcgaagag
cttctgacttag

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