Pyrenophora tritici-repentis: 6345376
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Entry
6345376 CDS
T10215
Symbol
PtrM4_042870
Name
(RefSeq) WD40 repeat protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptrr03009
]
6345376 (PtrM4_042870)
Ribosome biogenesis [BR:
ptrr03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
6345376 (PtrM4_042870)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_VPS8
WDR55
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_WDR19_1st
Nbas_N
NBCH_WD40
WD40_MABP1-WDR62_1st
DivIC
Beta-prop_LRRK2
Cep57_CLD_2
Gryzun-like
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
6345376
NCBI-ProteinID:
XP_001937436
UniProt:
B2WBU1
LinkDB
All DBs
Position
10:complement(1191011..1192742)
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AA seq
556 aa
AA seq
DB search
MLTEQFVAAISASTKPNTGVTKDAGIFIHEFQPLVAQRQVFKKSATAPNGVAVSSSHIFA
AQSEKAIVHVYSREKGNQEALVPFPERIHSIALAAQDSVLLLGTESGRILAWEICSGRLV
STSTSHLQPVTCIVVDPSSNFFLSGSSDAMIHVWALPSILSFSPDASRSPLHTLSTHRGP
ISSIACGHSWSSANIAVSISGDKSAIVWDYHNGQALRTYLLQEAPTAVTLDPADRAFYVA
YADGSLQTIDFYDEVQKHTLLDLLRDSASSHRPIQPSPKTRFSADSQKLGGALSLSLSWD
GTTLLSGHASGKIATWDIAKANYLSTPANLPGPVSNLRFLPPVGFPNTREPTFKIQTIVK
PKQDAGMTSSGNGLIPPNYTLNMQLTGRLHIPHLSATENKSTRKSAFKEALTHPCFPTDM
LEESLAELDSWNAQNKGGSAPAADFMALDEDSTSGSISAGDAQQAEVKELKKQLASLQRI
QKVTFSQLAELRQEKDYFVRQAKKRADRAKVRAKNNMGLAHNGANDSHAGGDVEMNDCTD
ATSESESDDIDAADES
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgaacaattcgtggccgccatttcggcgtcaaccaagccaaacaccggcgtc
accaaagatgccggcattttcatccacgagttccagccattggttgcgcagagacaagtg
tttaagaagagcgcaactgcgccaaatggcgtcgctgtgagcagctcgcatattttcgcc
gctcagtcggaaaaggcgattgttcatgtgtatagcagagaaaagggcaaccaggaggct
ttggtaccgtttccagagcggatacatagcatcgccctcgcggcgcaggacagcgtgctg
ctgctgggaaccgagagtggacgaatattggcgtgggagatctgctccggtcgcctcgtc
tctacatctacatcccacctgcagccagtaacatgtattgtcgtcgacccctcgtccaac
ttcttcctatctggctcctcggatgccatgatacacgtatgggcgctgccatcgatactt
tccttctcgcctgacgcctcacgctcgcctttacatacactttcaacccaccgtggccct
atatcgtccatcgcctgcgggcatagttggagcagtgccaacattgccgtttcgatttcg
ggggacaagtcggccatagtttgggactaccataacggccaagcgctgaggacatatctg
ctgcaagaggcacccactgcagtcactcttgatccggcagaccgggccttctacgttgct
tatgccgacggcagcctacagaccatcgacttctacgatgaggtgcagaagcacacgttg
ctcgaccttctccgtgatagtgcatcgtctcaccgccctattcaaccgtcaccaaagacc
cggttcagtgccgactcgcagaagctgggtggtgcgctcagtctgagtttgagctgggat
ggtacaacattgttatctggccatgcaagcggtaagattgcgacttgggacattgcaaag
gccaattatctctctacacctgccaatctgccaggccctgtttcaaaccttcgctttcta
ccacctgtaggcttccccaatacacgggagccaacctttaagatccagactattgtcaaa
ccgaaacaggatgctggaatgacaagcagcgggaatggcctgatcccaccaaactatacc
ttgaacatgcagctgacaggccggctgcacattcctcacttgtctgccactgagaacaag
tctacgaggaagagtgcattcaaagaggctctcacccacccctgctttcctaccgacatg
ctggaagagagcttagccgaattggactcatggaacgcccagaacaaaggcggctctgct
ccagcggccgacttcatggcactcgatgaagatagtactagtgggtccatatcagcaggt
gatgctcagcaagcagaagtcaaagagttgaagaagcagctagccagtctgcaacgcatt
caaaaggtcactttctcgcaattagcagaattgcgccaggaaaaggactactttgttcgc
caagcaaagaagagggctgaccgtgccaaagttcgtgcgaaaaataatatgggcctagcc
cacaatggcgcaaacgatagtcatgcaggcggcgacgtggagatgaacgactgcactgac
gccacctccgagtcagaatcagacgatattgatgcggctgacgagtcttga
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