KEGG   Pyrenophora tritici-repentis: 6345376
Entry
6345376           CDS       T10215                                 
Symbol
PtrM4_042870
Name
(RefSeq) WD40 repeat protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
ptrr  Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:ptrr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ptrr03009]
    6345376 (PtrM4_042870)
Ribosome biogenesis [BR:ptrr03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    6345376 (PtrM4_042870)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I WD40 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_VPS8 WDR55 Beta-prop_EML Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_WDR19_1st Nbas_N NBCH_WD40 WD40_MABP1-WDR62_1st DivIC Beta-prop_LRRK2 Cep57_CLD_2 Gryzun-like Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 6345376
NCBI-ProteinID: XP_001937436
UniProt: B2WBU1
LinkDB
Position
10:complement(1191011..1192742)
AA seq 556 aa
MLTEQFVAAISASTKPNTGVTKDAGIFIHEFQPLVAQRQVFKKSATAPNGVAVSSSHIFA
AQSEKAIVHVYSREKGNQEALVPFPERIHSIALAAQDSVLLLGTESGRILAWEICSGRLV
STSTSHLQPVTCIVVDPSSNFFLSGSSDAMIHVWALPSILSFSPDASRSPLHTLSTHRGP
ISSIACGHSWSSANIAVSISGDKSAIVWDYHNGQALRTYLLQEAPTAVTLDPADRAFYVA
YADGSLQTIDFYDEVQKHTLLDLLRDSASSHRPIQPSPKTRFSADSQKLGGALSLSLSWD
GTTLLSGHASGKIATWDIAKANYLSTPANLPGPVSNLRFLPPVGFPNTREPTFKIQTIVK
PKQDAGMTSSGNGLIPPNYTLNMQLTGRLHIPHLSATENKSTRKSAFKEALTHPCFPTDM
LEESLAELDSWNAQNKGGSAPAADFMALDEDSTSGSISAGDAQQAEVKELKKQLASLQRI
QKVTFSQLAELRQEKDYFVRQAKKRADRAKVRAKNNMGLAHNGANDSHAGGDVEMNDCTD
ATSESESDDIDAADES
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgctcaccgaacaattcgtggccgccatttcggcgtcaaccaagccaaacaccggcgtc
accaaagatgccggcattttcatccacgagttccagccattggttgcgcagagacaagtg
tttaagaagagcgcaactgcgccaaatggcgtcgctgtgagcagctcgcatattttcgcc
gctcagtcggaaaaggcgattgttcatgtgtatagcagagaaaagggcaaccaggaggct
ttggtaccgtttccagagcggatacatagcatcgccctcgcggcgcaggacagcgtgctg
ctgctgggaaccgagagtggacgaatattggcgtgggagatctgctccggtcgcctcgtc
tctacatctacatcccacctgcagccagtaacatgtattgtcgtcgacccctcgtccaac
ttcttcctatctggctcctcggatgccatgatacacgtatgggcgctgccatcgatactt
tccttctcgcctgacgcctcacgctcgcctttacatacactttcaacccaccgtggccct
atatcgtccatcgcctgcgggcatagttggagcagtgccaacattgccgtttcgatttcg
ggggacaagtcggccatagtttgggactaccataacggccaagcgctgaggacatatctg
ctgcaagaggcacccactgcagtcactcttgatccggcagaccgggccttctacgttgct
tatgccgacggcagcctacagaccatcgacttctacgatgaggtgcagaagcacacgttg
ctcgaccttctccgtgatagtgcatcgtctcaccgccctattcaaccgtcaccaaagacc
cggttcagtgccgactcgcagaagctgggtggtgcgctcagtctgagtttgagctgggat
ggtacaacattgttatctggccatgcaagcggtaagattgcgacttgggacattgcaaag
gccaattatctctctacacctgccaatctgccaggccctgtttcaaaccttcgctttcta
ccacctgtaggcttccccaatacacgggagccaacctttaagatccagactattgtcaaa
ccgaaacaggatgctggaatgacaagcagcgggaatggcctgatcccaccaaactatacc
ttgaacatgcagctgacaggccggctgcacattcctcacttgtctgccactgagaacaag
tctacgaggaagagtgcattcaaagaggctctcacccacccctgctttcctaccgacatg
ctggaagagagcttagccgaattggactcatggaacgcccagaacaaaggcggctctgct
ccagcggccgacttcatggcactcgatgaagatagtactagtgggtccatatcagcaggt
gatgctcagcaagcagaagtcaaagagttgaagaagcagctagccagtctgcaacgcatt
caaaaggtcactttctcgcaattagcagaattgcgccaggaaaaggactactttgttcgc
caagcaaagaagagggctgaccgtgccaaagttcgtgcgaaaaataatatgggcctagcc
cacaatggcgcaaacgatagtcatgcaggcggcgacgtggagatgaacgactgcactgac
gccacctccgagtcagaatcagacgatattgatgcggctgacgagtcttga

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