Pyrenophora tritici-repentis: 6345585
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Entry
6345585 CDS
T10215
Symbol
PtrM4_040550
Name
(RefSeq) RhgB-N multi-domain protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
6345585 (PtrM4_040550)
Enzymes [BR:
ptrr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
6345585 (PtrM4_040550)
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Clr2_transil
Motif
Other DBs
NCBI-GeneID:
6345585
NCBI-ProteinID:
XP_001937644
UniProt:
B2WAJ9
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Position
10:complement(594885..596643)
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AA seq
531 aa
AA seq
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MLFKSTLLAVATLSAPALAAFGVTQTGTNIVVDTGSTATLVFTVDSTNCDIISLKYQGEE
LQDSKGGSQINSGLGSATVKFETVGNQYIKITCVAGTLTQYMVAKSGEANIYMATSTTAE
PAVGELRFLARIKNTVLPLEYPFGVVSTTNGETSTVEGSDVFIVGSQTRSKFYSSQRFID
DAVHCVYRDTTPIHACLVMNFYSYETSSGGPFHRDINTNNRPEESSLTFYMNSNHVQLEA
FRQGLHGPYALTFTGSSVPSGGSSLDTTFFKDLSIPGYVGPSARGTVTGSATGVASGLQT
VVHWYNSAAQYWAYADGSGKFTSPAMKPGTYTQVLYQGEFKVGASTVSVSAGAATTANIA
ASTDKRTTIWQIGVWDGQPKGFRNADKQLRMHPSDARMESWDPLTYTVGTSTLDSVPMAI
IQGKNPFTIKFSSTETGATTLRIGTTLAFQGCRPAVVVNSFSPATPAAPTLIDSRGFTRG
AYRGFGEVYDYALPAGTLLSSNSITISCASGSSGTGFLAPNVILDAIELFK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcaagagcacattgctggctgtggccacgctctccgcgccagctttggcagct
tttggcgttacacagactggtaccaatattgttgttgatacaggctcgactgccactcta
gtcttcactgtagactccacgaactgcgatatcatttcgctcaagtaccagggcgaggag
ctgcaggactccaagggagggtcacaaattaattctgggcttggcagtgcgacggttaag
tttgaaacagttggaaaccagtatatcaaaattacttgtgttgcgggtaccctaacgcaa
tacatggttgcaaagtccggagaagcaaatatatacatggcgacatctaccaccgctgag
cccgccgttggggaactacgcttccttgctcgtatcaagaacactgtgctacctctggag
tatccttttggtgtcgtgtcgacgactaatggagaaacttccacagtcgagggctcagat
gtcttcattgtaggcagccagacacggagcaagttttattccagccaacgcttcatcgat
gatgctgttcactgcgtataccgcgacacaaccccgattcatgcctgtcttgtcatgaac
ttctactcctatgagacctcctccggtggtcctttccaccgcgacatcaacaccaacaac
agacccgaagaatcatctctaactttctatatgaacagcaatcacgtgcagctcgaagca
ttccgccagggcttgcacggcccatatgcactaacattcaccggttcctccgtcccatcc
ggcggctcctccctcgacaccactttcttcaaagacctcagcatccccggctacgtcggc
ccctctgcccgcggcaccgtgaccggctcagcaacaggcgttgcctctggtctccaaact
gttgtccactggtacaacagcgcagcccaatactgggcctacgccgacggttccggaaaa
ttcacctccccagccatgaaaccaggaacgtacacccaagtcctgtaccaaggcgaattc
aaagtcggcgcctccaccgtttctgtctccgccggcgctgccaccacagcaaacatcgcc
gcgtctaccgacaagagaacgacgatctggcagattggtgtttgggacggccaaccaaag
gggttccgcaacgcggataaacagcttaggatgcatccttcggacgcgcgcatggaatct
tgggatccgcttacgtataccgttggtactagtaccctagatagcgtgcccatggctatc
attcagggaaagaaccccttcactatcaagttttccagcacggagacgggagctacgaca
cttcgcattggtactaccctcgctttccagggctgtaggcccgctgtcgtggttaatagt
tttagccctgcgacgcctgcggcgcccacgctgattgattcccgaggctttacgagaggg
gcgtatcgcgggttcggcgaggtttacgattatgctctcccggctggtacgctgcttagt
agtaatagtattacgattagttgtgcgagtgggagttcggggactgggtttttggcgcct
aatgttattctggatgcgatagagttgtttaagtga
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